RNA–Protein interactions for RNA: ENST00000533678.1

RDX-214, Transcript of radixin, humanhuman

TSL 4

Gene RDX, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-214ENST00000533678 PRDM12Q9H4Q4 367 aa18.32■□□□□ 0.52
RDX-214ENST00000533678 DHX33Q9H6R0 707 aaKnown RBP18.32■□□□□ 0.52
RDX-214ENST00000533678 C1orf112Q9NSG2 853 aa18.32■□□□□ 0.52
RDX-214ENST00000533678 FOXD4L1Q9NU39 408 aa18.32■□□□□ 0.52
RDX-214ENST00000533678 SUCLA2Q9P2R7 463 aaPredicted RBP18.32■□□□□ 0.52
RDX-214ENST00000533678 ST3GAL5Q9UNP4 418 aa18.32■□□□□ 0.52
RDX-214ENST00000533678 MYO9BQ13459 2157 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 POTEMA6NI47 508 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 UPP2O95045 317 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 STAG3L1P0CL83 205 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 MUTP22033 750 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 PRPHP41219 470 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 NPEPPSP55786 919 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 XKR9Q5GH70 373 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 HAUS3Q68CZ6 603 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 RTN4RL1Q86UN2 441 aaPredicted RBP18.31■□□□□ 0.52
RDX-214ENST00000533678 TMEM40Q8WWA1 233 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 NLRP7Q8WX94 980 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 SCLT1Q96NL6 688 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 SH2D3AQ9BRG2 576 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 GCOM2Q9BZD3 368 aaPredicted RBP18.31■□□□□ 0.52
RDX-214ENST00000533678 INO80BQ9C086 356 aaPredicted RBP18.31■□□□□ 0.52
RDX-214ENST00000533678 TMX1Q9H3N1 280 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 RGS18Q9NS28 235 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 CHD9Q3L8U1 2897 aa18.31■□□□□ 0.52
RDX-214ENST00000533678 LCHNA4D1U4 455 aa18.3■□□□□ 0.52
RDX-214ENST00000533678 LINC01553A4QN01 128 aa18.3■□□□□ 0.52
RDX-214ENST00000533678 ASAP2O43150 1006 aa18.3■□□□□ 0.52
RDX-214ENST00000533678 DARSP14868 501 aaKnown RBP18.3■□□□□ 0.52
RDX-214ENST00000533678 RPA1P27694 616 aa18.3■□□□□ 0.52
RDX-214ENST00000533678 PTGDRQ13258 359 aa18.3■□□□□ 0.52
RDX-214ENST00000533678 FAM228AQ86W67 206 aa18.3■□□□□ 0.52
RDX-214ENST00000533678 NPAS4Q8IUM7 802 aa18.3■□□□□ 0.52
RDX-214ENST00000533678 CCDC43Q96MW1 224 aaKnown RBP18.3■□□□□ 0.52
RDX-214ENST00000533678 SAMD11Q96NU1 681 aa18.3■□□□□ 0.52
RDX-214ENST00000533678 NACC1Q96RE7 527 aa18.3■□□□□ 0.52
RDX-214ENST00000533678 TGS1Q96RS0 853 aaKnown RBP18.3■□□□□ 0.52
RDX-214ENST00000533678 PPP1R16BQ96T49 567 aa18.3■□□□□ 0.52
RDX-214ENST00000533678 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.3■□□□□ 0.52
RDX-214ENST00000533678 THEGQ9P2T0 379 aa18.3■□□□□ 0.52
RDX-214ENST00000533678 PCDHB6Q9Y5E3 794 aa18.3■□□□□ 0.52
RDX-214ENST00000533678 RALGAPA2Q2PPJ7 1873 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 DENND3A2RUS2 1198 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 DGAT1O75907 488 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 SPATA31C1P0DKV0 1188 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 ERVK-21P61565 698 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 DRP2Q13474 957 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 SLC24A5Q71RS6 500 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 BRAPQ7Z569 592 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 CATSPER3Q86XQ3 398 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 RHPN2Q8IUC4 686 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 CRIPAKQ8N1N5 446 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 PSPC1Q8WXF1 523 aaKnown RBP18.29■□□□□ 0.52
RDX-214ENST00000533678 LINC01599Q8WXQ3 324 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 MTRQ99707 1265 aa18.29■□□□□ 0.52
RDX-214ENST00000533678 ZSCAN20P17040 1043 aaPredicted RBP18.28■□□□□ 0.52
RDX-214ENST00000533678 POU3F3P20264 500 aaPredicted RBP18.28■□□□□ 0.52
RDX-214ENST00000533678 SARSP49591 514 aaKnown RBP18.28■□□□□ 0.52
RDX-214ENST00000533678 NBR1Q14596 966 aa18.28■□□□□ 0.52
RDX-214ENST00000533678 EMC2Q15006 297 aa18.28■□□□□ 0.52
RDX-214ENST00000533678 DTHD1Q6ZMT9 781 aa18.28■□□□□ 0.52
RDX-214ENST00000533678 ZNF579Q8NAF0 562 aaKnown RBP18.28■□□□□ 0.52
RDX-214ENST00000533678 ARNTL2Q8WYA1 636 aa18.28■□□□□ 0.52
RDX-214ENST00000533678 ADAM2Q99965 735 aa18.28■□□□□ 0.52
RDX-214ENST00000533678 LRWD1Q9UFC0 647 aa18.28■□□□□ 0.52
RDX-214ENST00000533678 DBR1Q9UK59 544 aaKnown RBP18.28■□□□□ 0.52
RDX-214ENST00000533678 LRFN2Q9ULH4 789 aa18.28■□□□□ 0.52
RDX-214ENST00000533678 COL4A3BPQ9Y5P4 624 aa18.28■□□□□ 0.52
RDX-214ENST00000533678 NLRC5Q86WI3 1866 aa18.28■□□□□ 0.52
RDX-214ENST00000533678 A0A087WZ62 844 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 ZBTB39O15060 712 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 DGKIO75912 1065 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 ARHGEF15O94989 841 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 SFPQP23246 707 aaKnown RBP eCLIP18.27■□□□□ 0.52
RDX-214ENST00000533678 ANP32AP39687 249 aaKnown RBP18.27■□□□□ 0.52
RDX-214ENST00000533678 RARRES1P49788 294 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 FAM189BP81408 668 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 DSC3Q14574 896 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 MXD4Q14582 209 aaPredicted RBP18.27■□□□□ 0.52
RDX-214ENST00000533678 IGSF22Q8N9C0 903 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 SPRYD3Q8NCJ5 442 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 PRPF31Q8WWY3 499 aaKnown RBP18.27■□□□□ 0.52
RDX-214ENST00000533678 PPM1EQ8WY54 764 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 ZNF689Q96CS4 500 aaPredicted RBP18.27■□□□□ 0.52
RDX-214ENST00000533678 FDXACB1Q9BRP7 624 aaPredicted RBP18.27■□□□□ 0.52
RDX-214ENST00000533678 ELAC1Q9H777 363 aaKnown RBP18.27■□□□□ 0.52
RDX-214ENST00000533678 ATP6V0A4Q9HBG4 840 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 CHST12Q9NRB3 414 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 CHD7Q9P2D1 2997 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 RWDD3Q9Y3V2 267 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 PCDHB7Q9Y5E2 793 aa18.27■□□□□ 0.52
RDX-214ENST00000533678 C9IYK1 514 aa18.26■□□□□ 0.51
RDX-214ENST00000533678 MGEA5O60502 916 aa18.26■□□□□ 0.51
RDX-214ENST00000533678 MED24O75448 989 aa18.26■□□□□ 0.51
RDX-214ENST00000533678 BMP15O95972 392 aa18.26■□□□□ 0.51
RDX-214ENST00000533678 ATP2C1P98194 919 aaPredicted RBP18.26■□□□□ 0.51
RDX-214ENST00000533678 ARL6IP4Q66PJ3 421 aaKnown RBP18.26■□□□□ 0.51
RDX-214ENST00000533678 SRGAP1Q7Z6B7 1085 aa18.26■□□□□ 0.51
RDX-214ENST00000533678 FERMT3Q86UX7 667 aa18.26■□□□□ 0.51
RDX-214ENST00000533678 FIBCD1Q8N539 461 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms