RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 C22orf31O95567 290 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 CA3P07451 260 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 FOSL2P15408 326 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 TMOD1P28289 359 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 LPIN1Q14693 890 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 GRIN2CQ14957 1233 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 UGCGQ16739 394 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 FBXO47Q5MNV8 452 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 RESP18Q5W5W9 173 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 FAM117BQ6P1L5 589 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 CCDC73Q6ZRK6 1079 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 EXOC8Q8IYI6 725 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 USP38Q8NB14 1042 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 BANK1Q8NDB2 785 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 MYLIPQ8WY64 445 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 SYMPKQ92797 1274 aaKnown RBP19.17■□□□□ 0.66
CTSB-229ENST00000533572 CHAMP1Q96JM3 812 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 MAP7D2Q96T17 732 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 GAS2L1Q99501 681 aaPredicted RBP19.17■□□□□ 0.66
CTSB-229ENST00000533572 CELF4Q9BZC1 486 aaKnown RBP19.17■□□□□ 0.66
CTSB-229ENST00000533572 RGL1Q9NZL6 768 aa19.17■□□□□ 0.66
CTSB-229ENST00000533572 MED24O75448 989 aa19.16■□□□□ 0.66
CTSB-229ENST00000533572 SPATA31C1P0DKV0 1188 aa19.16■□□□□ 0.66
CTSB-229ENST00000533572 CYP4A11Q02928 519 aa19.16■□□□□ 0.66
CTSB-229ENST00000533572 TBC1D8BQ0IIM8 1120 aa19.16■□□□□ 0.66
CTSB-229ENST00000533572 CTTNQ14247 550 aaKnown RBP19.16■□□□□ 0.66
CTSB-229ENST00000533572 SHC4Q6S5L8 630 aa19.16■□□□□ 0.66
CTSB-229ENST00000533572 MRPS27Q92552 414 aaKnown RBP19.16■□□□□ 0.66
CTSB-229ENST00000533572 EPSTI1Q96J88 318 aa19.16■□□□□ 0.66
CTSB-229ENST00000533572 MMTAG2Q9BU76 263 aaKnown RBP19.16■□□□□ 0.66
CTSB-229ENST00000533572 ANKEF1Q9NU02 776 aa19.16■□□□□ 0.66
CTSB-229ENST00000533572 DNM3Q9UQ16 869 aa19.16■□□□□ 0.66
CTSB-229ENST00000533572 SQORQ9Y6N5 450 aa19.16■□□□□ 0.66
CTSB-229ENST00000533572 MICAL3Q7RTP6 2002 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 CUL9Q8IWT3 2517 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 FAM237AA0A1B0GTK4 181 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 PP2D1A8MPX8 630 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 ZBTB42B2RXF5 422 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 GJB5O95377 273 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 CDC25AP30304 524 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 UBE2HP62256 183 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 PAK2Q13177 524 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 MTERF2Q49AM1 385 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 ODR4Q5SWX8 454 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.15■□□□□ 0.664e-6■□□□□ 9.4
CTSB-229ENST00000533572 TMCO2Q7Z6W1 182 aaPredicted RBP19.15■□□□□ 0.66
CTSB-229ENST00000533572 KIAA0319LQ8IZA0 1049 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 CCDC43Q96MW1 224 aaKnown RBP19.15■□□□□ 0.66
CTSB-229ENST00000533572 RAD9AQ99638 391 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 NIFKQ9BYG3 293 aaKnown RBP19.15■□□□□ 0.66
CTSB-229ENST00000533572 OSBPL7Q9BZF2 842 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 CUEDC2Q9H467 287 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 PRDM12Q9H4Q4 367 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 STK17AQ9UEE5 414 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 USP25Q9UHP3 1055 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 DBR1Q9UK59 544 aaKnown RBP19.15■□□□□ 0.66
CTSB-229ENST00000533572 AKT3Q9Y243 479 aa19.15■□□□□ 0.66
CTSB-229ENST00000533572 WDR81Q562E7 1941 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 DDX11L8A8MPP1 907 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 PTMSP20962 102 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 CD52P31358 61 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 YWHABP31946 246 aaKnown RBP19.14■□□□□ 0.65
CTSB-229ENST00000533572 CLCN3P51790 818 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 TMEM119Q4V9L6 283 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 SPECC1Q5M775 1068 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 RRAGBQ5VZM2 374 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 EFCAB12Q6NXP0 572 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 IQUBQ8NA54 791 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 CCDC34Q96HJ3 373 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 SCLT1Q96NL6 688 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 FTHL17Q9BXU8 183 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 SUGCTQ9HAC7 445 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 DDX19AQ9NUU7 478 aaKnown RBP19.14■□□□□ 0.65
CTSB-229ENST00000533572 KIAA1024Q9UPX6 916 aa19.14■□□□□ 0.65
CTSB-229ENST00000533572 EVPLQ92817 2033 aa19.13■□□□□ 0.65
CTSB-229ENST00000533572 ZRSR1Q15695 479 aaKnown RBP19.13■□□□□ 0.65
CTSB-229ENST00000533572 ZNF710Q8N1W2 664 aa19.13■□□□□ 0.65
CTSB-229ENST00000533572 LRRC71Q8N4P6 559 aa19.13■□□□□ 0.65
CTSB-229ENST00000533572 PPP1R16BQ96T49 567 aa19.13■□□□□ 0.65
CTSB-229ENST00000533572 YME1L1Q96TA2 773 aa19.13■□□□□ 0.65
CTSB-229ENST00000533572 JPH2Q9BR39 696 aaPredicted RBP19.13■□□□□ 0.65
CTSB-229ENST00000533572 MAGEF1Q9HAY2 307 aa19.13■□□□□ 0.65
CTSB-229ENST00000533572 KCNH3Q9ULD8 1083 aa19.13■□□□□ 0.65
CTSB-229ENST00000533572 INSL6Q9Y581 213 aa19.13■□□□□ 0.65
CTSB-229ENST00000533572 TCHHQ07283 1943 aa19.13■□□□□ 0.65
CTSB-229ENST00000533572 SIP14410 1827 aa19.12■□□□□ 0.65
CTSB-229ENST00000533572 PRPF40AO75400 957 aaKnown RBP19.12■□□□□ 0.65
CTSB-229ENST00000533572 RPS6KA5O75582 802 aa19.12■□□□□ 0.65
CTSB-229ENST00000533572 UPP2O95045 317 aa19.12■□□□□ 0.65
CTSB-229ENST00000533572 EYA4O95677 639 aa19.12■□□□□ 0.65
CTSB-229ENST00000533572 VTNP04004 478 aa19.12■□□□□ 0.65
CTSB-229ENST00000533572 DNM2P50570 870 aa19.12■□□□□ 0.65
CTSB-229ENST00000533572 NFX1Q12986 1120 aaKnown RBP19.12■□□□□ 0.65
CTSB-229ENST00000533572 GRB10Q13322 594 aa19.12■□□□□ 0.65
CTSB-229ENST00000533572 KARSQ15046 597 aaKnown RBP19.12■□□□□ 0.65
CTSB-229ENST00000533572 KIZQ2M2Z5 673 aa19.12■□□□□ 0.65
CTSB-229ENST00000533572 POTEGQ6S5H5 508 aa19.12■□□□□ 0.65
CTSB-229ENST00000533572 FSIP1Q8NA03 581 aa19.12■□□□□ 0.65
CTSB-229ENST00000533572 PNMA5Q96PV4 448 aa19.12■□□□□ 0.65
CTSB-229ENST00000533572 LRRC27Q9C0I9 530 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms