RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 DHX15O43143 795 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 ATP4AP20648 1035 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 CDC27P30260 824 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 LLGL2Q6P1M3 1020 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 ASCL5Q7RTU5 278 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 FBXL6Q8N531 539 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 BBXQ8WY36 941 aaPredicted RBP17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 MAP7D2Q96T17 732 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 KIF2CQ99661 725 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 APOL5Q9BWW9 433 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 AGXT2Q9BYV1 514 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 TM6SF1Q9BZW5 370 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 CWH43Q9H720 699 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 RBM19Q9Y4C8 960 aaKnown RBP17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 CYP46A1Q9Y6A2 500 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 EPG5Q9HCE0 2579 aa17.79■□□□□ 0.44
CHMP4A-207ENST00000533523 GPR32O75388 356 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 PSAPP07602 524 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 SP100P23497 879 aaPredicted RBP17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 PBX3P40426 434 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 TECP42680 631 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 PFKFB3Q16875 520 aaPredicted RBP17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 PDE12Q6L8Q7 609 aaKnown RBP17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 ZNF746Q6NUN9 644 aaPredicted RBP17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 FAM43BQ6ZT52 329 aaPredicted RBP17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 RUFY3Q7L099 469 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 ABI1Q8IZP0 508 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 REXO1Q8N1G1 1221 aaKnown RBP17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 LRRC43Q8N309 656 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 RNF169Q8NCN4 708 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 SUSD6Q92537 303 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 SCLT1Q96NL6 688 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 TCF25Q9BQ70 676 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 TMEM117Q9H0C3 514 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 ZSWIM6Q9HCJ5 1215 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 GABBR1Q9UBS5 961 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 SAMM50Q9Y512 469 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 NCOR2Q9Y618 2525 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 NID2Q14112 1375 aa17.78■□□□□ 0.44
CHMP4A-207ENST00000533523 HOXA2O43364 376 aa17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 ATF7P17544 494 aaPredicted RBP17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 DSC3Q14574 896 aa17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 PRR16Q569H4 304 aa17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 ZBTB33Q86T24 672 aa17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 SMAP1Q8IYB5 467 aaPredicted RBP17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 LRRC71Q8N4P6 559 aa17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 MRPS27Q92552 414 aaKnown RBP17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 ZNF668Q96K58 619 aaPredicted RBP17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 FAM167AQ96KS9 214 aa17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 ZNF558Q96NG5 402 aa17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 ELAC1Q9H777 363 aaKnown RBP17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 FAM217BQ9NTX9 383 aaPredicted RBP17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 TBC1D22BQ9NU19 505 aa17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 PUF60Q9UHX1 559 aaKnown RBP17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 CEP131Q9UPN4 1083 aa17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 LZTS1Q9Y250 596 aa17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 MAFBQ9Y5Q3 323 aaPredicted RBP17.77■□□□□ 0.44
CHMP4A-207ENST00000533523 ADAMTS3O15072 1205 aa17.76■□□□□ 0.43
CHMP4A-207ENST00000533523 CYP3A4P08684 503 aa17.76■□□□□ 0.43
CHMP4A-207ENST00000533523 PPM1AP35813 382 aa17.76■□□□□ 0.43
CHMP4A-207ENST00000533523 SIGLEC14Q08ET2 396 aa17.76■□□□□ 0.43
CHMP4A-207ENST00000533523 ANKRD54Q6NXT1 300 aa17.76■□□□□ 0.43
CHMP4A-207ENST00000533523 CCDC12Q8WUD4 166 aaPredicted RBP17.76■□□□□ 0.43
CHMP4A-207ENST00000533523 CRYGNQ8WXF5 182 aa17.76■□□□□ 0.43
CHMP4A-207ENST00000533523 CASD1Q96PB1 797 aa17.76■□□□□ 0.43
CHMP4A-207ENST00000533523 C6orf50Q9HD87 102 aa17.76■□□□□ 0.43
CHMP4A-207ENST00000533523 PCDHA10Q9Y5I2 948 aa17.76■□□□□ 0.43
CHMP4A-207ENST00000533523 ESYT2A0FGR8 921 aa17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 HIDE1A8MVS5 230 aa17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 WDR64B1ANS9 1081 aa17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 ZSCAN20P17040 1043 aaPredicted RBP17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 TMOD1P28289 359 aa17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 CA8P35219 290 aa17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 ADD1P35611 737 aaKnown RBP17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 NLRP11P59045 1033 aaKnown RBP17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 FAM189BP81408 668 aa17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 PRKCEQ02156 737 aa17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 PKN1Q16512 942 aa17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 EFCAB12Q6NXP0 572 aa17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 KCNT2Q6UVM3 1135 aa17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 RASGRP4Q8TDF6 673 aa17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 RNF19AQ9NV58 838 aa17.75■□□□□ 0.43
CHMP4A-207ENST00000533523 H0Y858 1186 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 MAGEB2O15479 319 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 CHMP2AO43633 222 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 OATP04181 439 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 EVCP57679 992 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 PLCB3Q01970 1234 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 RABEP1Q15276 862 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 PTPN21Q16825 1174 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 MCTP2Q6DN12 878 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 LRRC55Q6ZSA7 311 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 TMC7Q7Z402 723 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 ECHDC2Q86YB7 292 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 PRRX2Q99811 253 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 ZMYND12Q9H0C1 365 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 ADAMTS10Q9H324 1103 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 NGRNQ9NPE2 291 aaKnown RBP17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 CDH22Q9UJ99 828 aa17.74■□□□□ 0.43
CHMP4A-207ENST00000533523 DENND4AQ7Z401 1863 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms