RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 INTS2Q9H0H0 1204 aaKnown RBP18.87■□□□□ 0.61
PHRF1-205ENST00000533464 USP32Q8NFA0 1604 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 EXOC1LA0A1B0GW35 172 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 TXNDC9O14530 226 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 EPHA7Q15375 998 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 CDC42EP5Q6NZY7 148 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 FAM167AQ96KS9 214 aa18.87■□□□□ 0.61
PHRF1-205ENST00000533464 NPHP3-ACAD11A0A0J9YXS1 232 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 PDHBP11177 359 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 DDX23Q9BUQ8 820 aaKnown RBP18.86■□□□□ 0.61
PHRF1-205ENST00000533464 STXBP3O00186 592 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 OATP04181 439 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 GSPT2Q8IYD1 628 aaKnown RBP18.86■□□□□ 0.61
PHRF1-205ENST00000533464 TMEM35BQ8NCS4 154 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 ZWILCHQ9H900 591 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 NGRNQ9NPE2 291 aaKnown RBP18.86■□□□□ 0.61
PHRF1-205ENST00000533464 RRP15Q9Y3B9 282 aaKnown RBP18.86■□□□□ 0.61
PHRF1-205ENST00000533464 CNTNAP5Q8WYK1 1306 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 SYNGAP1Q96PV0 1343 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 PODXLO00592 558 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 PSMA2P25787 234 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 NMT1P30419 496 aaKnown RBP18.86■□□□□ 0.61
PHRF1-205ENST00000533464 GLYCTKQ8IVS8 523 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 KCNB2Q92953 911 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 HEMGNQ9BXL5 484 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 CNOT10Q9H9A5 744 aaKnown RBP18.86■□□□□ 0.61
PHRF1-205ENST00000533464 DIS3Q9Y2L1 958 aaKnown RBP18.86■□□□□ 0.61
PHRF1-205ENST00000533464 NOL3O60936 208 aaKnown RBP18.86■□□□□ 0.61
PHRF1-205ENST00000533464 RHOBTB3O94955 611 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 GRIN1Q05586 938 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 PDXDC1Q6P996 788 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 CATSPER4Q7RTX7 472 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 ABI1Q8IZP0 508 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 DNAAF3Q8N9W5 541 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 C11orf70Q9BRQ4 267 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 PACSIN2Q9UNF0 486 aaPredicted RBP18.86■□□□□ 0.61
PHRF1-205ENST00000533464 MRFAP1Q9Y605 127 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 JCADQ9P266 1359 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 FRMPD1Q5SYB0 1578 aa18.86■□□□□ 0.61
PHRF1-205ENST00000533464 CDO1Q16878 200 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 TMEM60Q9H2L4 133 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 ESYT3A0FGR9 886 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 FTLP02792 175 aaPredicted RBP18.85■□□□□ 0.61
PHRF1-205ENST00000533464 ZNF211Q13398 564 aaPredicted RBP18.85■□□□□ 0.61
PHRF1-205ENST00000533464 PRPSAP1Q14558 356 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 KRT39Q6A163 491 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 HAUS6Q7Z4H7 955 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 ENGASEQ8NFI3 743 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 C7orf25Q9BPX7 421 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 ZNF302Q9NR11 478 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 ADAM21Q9UKJ8 722 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 PNMA3Q9UL41 463 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 PLAAQ9Y263 795 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 FXR1P51114 621 aaKnown RBP eCLIP18.85■□□□□ 0.61
PHRF1-205ENST00000533464 TROAPQ12815 778 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 PSPC1Q8WXF1 523 aaKnown RBP18.85■□□□□ 0.61
PHRF1-205ENST00000533464 EDEM3Q9BZQ6 932 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 HMGB1P1B2RPK0 211 aaPredicted RBP18.85■□□□□ 0.61
PHRF1-205ENST00000533464 ATP1A1P05023 1023 aaKnown RBP18.85■□□□□ 0.61
PHRF1-205ENST00000533464 ECE1P42892 770 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 METTL23Q86XA0 190 aa18.85■□□□□ 0.61
PHRF1-205ENST00000533464 GIMAP8Q8ND71 665 aaPredicted RBP18.85■□□□□ 0.61
PHRF1-205ENST00000533464 PDXKO00764 312 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 MT-ND3P03897 115 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 ZNF18P17022 549 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 ZSCAN20P17040 1043 aaPredicted RBP18.84■□□□□ 0.61
PHRF1-205ENST00000533464 FRMD5Q7Z6J6 570 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 PDIK1LQ8N165 341 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 DDX47Q9H0S4 455 aaKnown RBP18.84■□□□□ 0.61
PHRF1-205ENST00000533464 SIX6OS1Q8N1H7 587 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 OR6B3Q8NGW1 331 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 MTRQ99707 1265 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 CCDC68Q9H2F9 335 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 NYAP2Q9P242 653 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 KLRK1P26718 216 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 NR1I3Q14994 352 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 PDS5AQ29RF7 1337 aaKnown RBP18.84■□□□□ 0.61
PHRF1-205ENST00000533464 EMSYQ7Z589 1322 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 MYMKA6NI61 221 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 ZNF568Q3ZCX4 644 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 HHIPL2Q6UWX4 724 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 SMYD2Q9NRG4 433 aa18.84■□□□□ 0.61
PHRF1-205ENST00000533464 CFAP61Q8NHU2 1237 aa18.83■□□□□ 0.61
PHRF1-205ENST00000533464 VCXQ9H320 206 aa18.83■□□□□ 0.61
PHRF1-205ENST00000533464 ACAD9Q9H845 621 aa18.83■□□□□ 0.61
PHRF1-205ENST00000533464 PCDHA10Q9Y5I2 948 aa18.83■□□□□ 0.61
PHRF1-205ENST00000533464 UBE2Q2LH0YL09 131 aa18.83■□□□□ 0.61
PHRF1-205ENST00000533464 GSTA1P08263 222 aa18.83■□□□□ 0.61
PHRF1-205ENST00000533464 GSTA2P09210 222 aa18.83■□□□□ 0.61
PHRF1-205ENST00000533464 C6orf118Q5T5N4 469 aa18.83■□□□□ 0.61
PHRF1-205ENST00000533464 SH2D3AQ9BRG2 576 aa18.83■□□□□ 0.61
PHRF1-205ENST00000533464 NBPF3Q9H094 633 aa18.83■□□□□ 0.61
PHRF1-205ENST00000533464 MAGED2Q9UNF1 606 aaPredicted RBP18.83■□□□□ 0.61
PHRF1-205ENST00000533464 TJP3O95049 919 aa18.83■□□□□ 0.6
PHRF1-205ENST00000533464 NFX1Q12986 1120 aaKnown RBP18.83■□□□□ 0.6
PHRF1-205ENST00000533464 TERF2Q15554 542 aa18.83■□□□□ 0.6
PHRF1-205ENST00000533464 ZNF699Q32M78 642 aa18.83■□□□□ 0.6
PHRF1-205ENST00000533464 SALL3Q9BXA9 1300 aa18.83■□□□□ 0.6
PHRF1-205ENST00000533464 ZBED1O96006 694 aa18.83■□□□□ 0.6
PHRF1-205ENST00000533464 INTS5Q6P9B9 1019 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms