RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 SNX21Q969T3 373 aa12.81□□□□□ -0.36
UBASH3B-208ENST00000533451 INTS4Q96HW7 963 aaKnown RBP12.81□□□□□ -0.36
UBASH3B-208ENST00000533451 JPH2Q9BR39 696 aaPredicted RBP12.81□□□□□ -0.36
UBASH3B-208ENST00000533451 LRWD1Q9UFC0 647 aa12.81□□□□□ -0.36
UBASH3B-208ENST00000533451 YBX2Q9Y2T7 364 aaKnown RBP12.81□□□□□ -0.36
UBASH3B-208ENST00000533451 PCDHA11Q9Y5I1 949 aa12.81□□□□□ -0.36
UBASH3B-208ENST00000533451 DENND3A2RUS2 1198 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 ZBTB39O15060 712 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 SNPHO15079 494 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 SLITRK3O94933 977 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 CA3P07451 260 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 SYT1P21579 422 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 RFC5P40937 340 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 EMC2Q15006 297 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 TARBP2Q15633 366 aaKnown RBP12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 POTEGQ6S5H5 508 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 BRAPQ7Z569 592 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 USP38Q8NB14 1042 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 PHOSPHO2Q8TCD6 241 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 PIGOQ8TEQ8 1089 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 NLRP4Q96MN2 994 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 TMEM121BQ9BXQ6 578 aaPredicted RBP12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 ZNF576Q9H609 170 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 AGO3Q9H9G7 860 aaKnown RBP12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 CDHR5Q9HBB8 845 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 SUCLA2Q9P2R7 463 aaPredicted RBP12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 PADI3Q9ULW8 664 aa12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 NOC2LQ9Y3T9 749 aaKnown RBP12.8□□□□□ -0.36
UBASH3B-208ENST00000533451 LAD1O00515 517 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 USO1O60763 962 aaKnown RBP12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 MAFO75444 373 aaPredicted RBP12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 STBD1O95210 358 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 CRYBB1P53674 252 aaPredicted RBP12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 DRP2Q13474 957 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 ODR4Q5SWX8 454 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 FOXD4L5Q5VV16 416 aaPredicted RBP12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 DTHD1Q6ZMT9 781 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 EXOC8Q8IYI6 725 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 SNX29Q8TEQ0 813 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 FOXD4L4Q8WXT5 416 aaPredicted RBP12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 TMEM143Q96AN5 459 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 YME1L1Q96TA2 773 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 MTRQ99707 1265 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 TTYH1Q9H313 450 aaPredicted RBP12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 SEMA6BQ9H3T3 888 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 CERS4Q9HA82 394 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 ATP6V0A4Q9HBG4 840 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 TUFT1Q9NNX1 390 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 MTUS1Q9ULD2 1270 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 LRFN2Q9ULH4 789 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 KDM3AQ9Y4C1 1321 aa12.79□□□□□ -0.36
UBASH3B-208ENST00000533451 VWA3AA6NCI4 1184 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 GPR182O15218 404 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 STX6O43752 255 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 MED24O75448 989 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 GJB5O95377 273 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 GPC3P51654 580 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 CEBPZQ03701 1054 aaKnown RBP12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 KRT79Q5XKE5 535 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 CATSPER3Q86XQ3 398 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 RASSF8Q8NHQ8 419 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 TMEM40Q8WWA1 233 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 PSPC1Q8WXF1 523 aaKnown RBP12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 CDK5RAP3Q96JB5 506 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 HSD17B14Q9BPX1 270 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 FTHL17Q9BXU8 183 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 GCOM2Q9BZD3 368 aaPredicted RBP12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 MTMR10Q9NXD2 777 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 ST3GAL5Q9UNP4 418 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 PPME1Q9Y570 386 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 SQORQ9Y6N5 450 aa12.78□□□□□ -0.36
UBASH3B-208ENST00000533451 TMEM265A0A087WTH1 108 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 A0A087WZ62 844 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 ARHGEF35A5YM69 484 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 PP2D1A8MPX8 630 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 GPR32O75388 356 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 CSDE1O75534 798 aaKnown RBP12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 SRGAP2CP0DJJ0 459 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 SPATA31C1P0DKV0 1188 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 FGFR4P22455 802 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 PRPHP41219 470 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 ATP2C1P98194 919 aaPredicted RBP12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 MAEAQ7L5Y9 396 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 FAM228AQ86W67 206 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 KSR1Q8IVT5 923 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 ZNF710Q8N1W2 664 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 LINC01465Q8N7H1 131 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 C4orf32Q8N8J7 132 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 TCP11Q8WWU5 503 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 MYLIPQ8WY64 445 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 GUCD1Q96NT3 240 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 NACC1Q96RE7 527 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 RAD9AQ99638 391 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 FDXACB1Q9BRP7 624 aaPredicted RBP12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 POLR3CQ9BUI4 534 aaPredicted RBP12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 PRDM12Q9H4Q4 367 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 ANKEF1Q9NU02 776 aa12.77□□□□□ -0.37
UBASH3B-208ENST00000533451 COL4A3BPQ9Y5P4 624 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms