RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 BIN1O00499 593 aa9.24□□□□□ -0.93
NEDD8-207ENST00000533242 CSPG5O95196 566 aa9.24□□□□□ -0.93
NEDD8-207ENST00000533242 TCF7P36402 384 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-207ENST00000533242 NRIP1P48552 1158 aa9.24□□□□□ -0.93
NEDD8-207ENST00000533242 SF3A1Q15459 793 aaKnown RBP9.24□□□□□ -0.93
NEDD8-207ENST00000533242 FAM43BQ6ZT52 329 aaPredicted RBP9.24□□□□□ -0.93
NEDD8-207ENST00000533242 AOPEPQ8N6M6 819 aa9.24□□□□□ -0.93
NEDD8-207ENST00000533242 KLHL23Q8NBE8 558 aa9.24□□□□□ -0.93
NEDD8-207ENST00000533242 POF1BQ8WVV4 589 aa9.24□□□□□ -0.93
NEDD8-207ENST00000533242 DNAJB3Q8WWF6 145 aa9.24□□□□□ -0.93
NEDD8-207ENST00000533242 ERAP1Q9NZ08 941 aa9.24□□□□□ -0.93
NEDD8-207ENST00000533242 A0A1W2PQ27 194 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 A0A1W2PQ64 194 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 A0A1W2PQD8 194 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 GSTTP1A0A1W2PQM5 241 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 RRN3P2A6NIE6 340 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 CYTH3O43739 400 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 YEATS4O95619 227 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 GLP2RO95838 553 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 NUBP1P53384 320 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 SP4Q02446 784 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 MARCH8Q5T0T0 291 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 RTN4RL1Q86UN2 441 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-207ENST00000533242 SGMS1Q86VZ5 419 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 DRC7Q8IY82 874 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 SEPT1Q8WYJ6 367 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 CUL5Q93034 780 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 GPRASP2Q96D09 838 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 SMARCAD1Q9H4L7 1026 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 AGO3Q9H9G7 860 aaKnown RBP9.23□□□□□ -0.93
NEDD8-207ENST00000533242 TRPV2Q9Y5S1 764 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 PIK3CDO00329 1044 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 ZBTB43O43298 467 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 RRP9O43818 475 aaKnown RBP9.23□□□□□ -0.93
NEDD8-207ENST00000533242 GFRA3O60609 400 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 PFKFB1P16118 471 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 CD52P31358 61 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 UBE3AQ05086 875 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 PTPAQ15257 358 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 IER5Q5VY09 327 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 ISM2Q6H9L7 571 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 BRAPQ7Z569 592 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 CCDC82Q8N4S0 544 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 MYRIPQ8NFW9 859 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 ATP8B4Q8TF62 1192 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 SUSD6Q92537 303 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 CDHR1Q96JP9 859 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 CLIC6Q96NY7 704 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 MAP3K14Q99558 947 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 SDF4Q9BRK5 362 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 TLE6Q9H808 572 aa9.23□□□□□ -0.93
NEDD8-207ENST00000533242 BARX2Q9UMQ3 279 aaPredicted RBP9.23□□□□□ -0.93
NEDD8-207ENST00000533242 GOLGA8AA7E2F4 631 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 IFIT3O14879 490 aaKnown RBP9.22□□□□□ -0.93
NEDD8-207ENST00000533242 ZNF202O95125 648 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 SCG2P13521 617 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 KCNA2P16389 499 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 PAN2Q504Q3 1202 aaKnown RBP9.22□□□□□ -0.93
NEDD8-207ENST00000533242 SHC4Q6S5L8 630 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 SARM1Q6SZW1 724 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 NFXL1Q6ZNB6 911 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 KCNG4Q8TDN1 519 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 ASIC4Q96FT7 647 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 TMEM87BQ96K49 555 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 CDCA3Q99618 268 aaPredicted RBP9.22□□□□□ -0.93
NEDD8-207ENST00000533242 KIAA1468Q9P260 1216 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 LRFN2Q9ULH4 789 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 M0QZ92 97 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 VCPP55072 806 aaKnown RBP9.22□□□□□ -0.93
NEDD8-207ENST00000533242 GRIN1Q05586 938 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 SLC39A14Q15043 492 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 PTPN21Q16825 1174 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 PDE12Q6L8Q7 609 aaKnown RBP9.22□□□□□ -0.93
NEDD8-207ENST00000533242 ZNF710Q8N1W2 664 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 GLG1Q92896 1179 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 SLC26A6Q9BXS9 759 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 AAASQ9NRG9 546 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 KCNJ14Q9UNX9 436 aa9.22□□□□□ -0.93
NEDD8-207ENST00000533242 IGSF9BQ9UPX0 1349 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 KDM3AQ9Y4C1 1321 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 ERICH2A1L162 156 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 USP27XA6NNY8 438 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 GOLGA6L6A8MZA4 724 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 GOLGA6L19H0YKK7 550 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 ATP9AO75110 1047 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 MARK3P27448 753 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 AVPR2P30518 371 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 LIFRP42702 1097 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 TROAPQ12815 778 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 PAK2Q13177 524 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 WTAPQ15007 396 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 DUSP6Q16828 381 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 SPECC1Q5M775 1068 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 SYNE3Q6ZMZ3 975 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.21□□□□□ -0.93
NEDD8-207ENST00000533242 RBM23Q86U06 439 aaKnown RBP9.21□□□□□ -0.93
NEDD8-207ENST00000533242 RPGRIP1Q96KN7 1286 aa9.21□□□□□ -0.93
NEDD8-207ENST00000533242 CELF4Q9BZC1 486 aaKnown RBP9.21□□□□□ -0.93
NEDD8-207ENST00000533242 FAM49AQ9H0Q0 323 aaPredicted RBP9.21□□□□□ -0.93
NEDD8-207ENST00000533242 ANO10Q9NW15 660 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms