RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 SPDYE2Q495Y8 402 aa18.35■□□□□ 0.53
VPS26B-206ENST00000531741 CASKIN2Q8WXE0 1202 aa18.35■□□□□ 0.53
VPS26B-206ENST00000531741 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.35■□□□□ 0.53
VPS26B-206ENST00000531741 POLD4Q9HCU8 107 aa18.35■□□□□ 0.53
VPS26B-206ENST00000531741 MYH11P35749 1972 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 IPO5O00410 1097 aaKnown RBP18.34■□□□□ 0.53
VPS26B-206ENST00000531741 ZBTB39O15060 712 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 ARP10275 920 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 MAPTP10636 758 aaKnown RBP18.34■□□□□ 0.53
VPS26B-206ENST00000531741 HSD17B4P51659 736 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 SKOR1P84550 965 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 CUL1Q13616 776 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 ALCAMQ13740 583 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 ODR4Q5SWX8 454 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 GJB7Q6PEY0 223 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.34■□□□□ 0.53
VPS26B-206ENST00000531741 NIPA1Q7RTP0 329 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 PEX26Q7Z412 305 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 SRLQ86TD4 932 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 ZIM3Q96PE6 472 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 MXRA8Q9BRK3 442 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 LXNQ9BS40 222 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 ISCUQ9H1K1 167 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 TMEM253P0C7T8 217 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 MAPK7Q13164 816 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 DLGAP5Q15398 846 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 NT5DC3Q86UY8 548 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 LDHDQ86WU2 507 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 METTL13Q8N6R0 699 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 LNX1Q8TBB1 728 aaPredicted RBP18.34■□□□□ 0.53
VPS26B-206ENST00000531741 HES6Q96HZ4 224 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 TAF1DQ9H5J8 278 aaPredicted RBP18.34■□□□□ 0.53
VPS26B-206ENST00000531741 APEX2Q9UBZ4 518 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 TTC7AQ9ULT0 858 aaPredicted RBP18.34■□□□□ 0.53
VPS26B-206ENST00000531741 RPTORQ8N122 1335 aa18.34■□□□□ 0.53
VPS26B-206ENST00000531741 ZSCAN5CA6NGD5 496 aaPredicted RBP18.33■□□□□ 0.52
VPS26B-206ENST00000531741 FAM153BP0C7A2 387 aa18.33■□□□□ 0.52
VPS26B-206ENST00000531741 COG2Q14746 738 aa18.33■□□□□ 0.52
VPS26B-206ENST00000531741 DRAP1Q14919 205 aaPredicted RBP18.33■□□□□ 0.52
VPS26B-206ENST00000531741 FAM153CQ494X1 144 aa18.33■□□□□ 0.52
VPS26B-206ENST00000531741 CFAP58Q5T655 872 aa18.33■□□□□ 0.52
VPS26B-206ENST00000531741 EMC10Q5UCC4 262 aa18.33■□□□□ 0.52
VPS26B-206ENST00000531741 SLC30A10Q6XR72 485 aa18.33■□□□□ 0.52
VPS26B-206ENST00000531741 U2AF1L4Q8WU68 220 aaKnown RBP18.33■□□□□ 0.52
VPS26B-206ENST00000531741 IFT81Q8WYA0 676 aa18.33■□□□□ 0.52
VPS26B-206ENST00000531741 VTI1AQ96AJ9 217 aa18.33■□□□□ 0.52
VPS26B-206ENST00000531741 GPR88Q9GZN0 384 aa18.33■□□□□ 0.52
VPS26B-206ENST00000531741 INTS2Q9H0H0 1204 aaKnown RBP18.33■□□□□ 0.52
VPS26B-206ENST00000531741 FAM153AQ9UHL3 310 aa18.33■□□□□ 0.52
VPS26B-206ENST00000531741 DNAJC12Q9UKB3 198 aa18.33■□□□□ 0.52
VPS26B-206ENST00000531741 ARHGEF35A5YM69 484 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 CEP104O60308 925 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 HSPA9P38646 679 aaKnown RBP18.32■□□□□ 0.52
VPS26B-206ENST00000531741 GALCP54803 685 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 GHRHRQ02643 423 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 BFSP1Q12934 665 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 CBWD6Q4V339 395 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 TTMPQ5BVD1 217 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 CBWD3Q5JTY5 395 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 CBWD5Q5RIA9 395 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 RFFLQ8WZ73 363 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 IKZF4Q9H2S9 585 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 DIS3Q9Y2L1 958 aaKnown RBP18.32■□□□□ 0.52
VPS26B-206ENST00000531741 RRP15Q9Y3B9 282 aaKnown RBP18.32■□□□□ 0.52
VPS26B-206ENST00000531741 ESYT3A0FGR9 886 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 CLRN2A0PK11 232 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 HIP1RO75146 1068 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 PTGER2P43116 358 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 IRAK1P51617 712 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 FAM83AQ86UY5 434 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 C12orf56Q8IXR9 622 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 DAW1Q8N136 415 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 MTMR14Q8NCE2 650 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 PIK3R5Q8WYR1 880 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 CCDC43Q96MW1 224 aaKnown RBP18.32■□□□□ 0.52
VPS26B-206ENST00000531741 CAPS2Q9BXY5 557 aa18.32■□□□□ 0.52
VPS26B-206ENST00000531741 NOC2LQ9Y3T9 749 aaKnown RBP18.32■□□□□ 0.52
VPS26B-206ENST00000531741 P4HA2O15460 535 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 ICAM1P05362 532 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 CAP2P40123 477 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 CYP2J2P51589 502 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 UBXN2AP68543 259 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 MYL7Q01449 175 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 MAP3K10Q02779 954 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 KIF22Q14807 665 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 FOXR1Q6PIV2 292 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 KLHL7Q8IXQ5 586 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 OGFOD1Q8N543 542 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 ARL8AQ96BM9 186 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 SLITRK6Q9H5Y7 841 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 TMEM206Q9H813 350 aa18.31■□□□□ 0.52
VPS26B-206ENST00000531741 DBR1Q9UK59 544 aaKnown RBP18.31■□□□□ 0.52
VPS26B-206ENST00000531741 P4HBP07237 508 aaKnown RBP18.3■□□□□ 0.52
VPS26B-206ENST00000531741 ITGB5P18084 799 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 RNASE9P60153 205 aaKnown RBP18.3■□□□□ 0.52
VPS26B-206ENST00000531741 ERVK-9P63128 1117 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 IRX5P78411 483 aaPredicted RBP18.3■□□□□ 0.52
VPS26B-206ENST00000531741 DAAM2Q86T65 1068 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 KSR1Q8IVT5 923 aa18.3■□□□□ 0.52
VPS26B-206ENST00000531741 LMO3Q8TAP4 145 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms