RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 MYCT1Q8N699 235 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 SLC43A3Q8NBI5 491 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 TCP11Q8WWU5 503 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 PPP1R16BQ96T49 567 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 TRPV6Q9H1D0 765 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 ODF2LQ9ULJ1 636 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 PCDHA2Q9Y5H9 948 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 SCN10AQ9Y5Y9 1956 aa19.55■□□□□ 0.72
CTSB-222ENST00000531551 CCDC85CA6NKD9 419 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 GAS2O43903 313 aaKnown RBP19.54■□□□□ 0.72
CTSB-222ENST00000531551 PQBP1O60828 265 aaKnown RBP19.54■□□□□ 0.72
CTSB-222ENST00000531551 MKRN4PQ13434 485 aaPredicted RBP19.54■□□□□ 0.72
CTSB-222ENST00000531551 HERC4Q5GLZ8 1057 aaPredicted RBP19.54■□□□□ 0.72
CTSB-222ENST00000531551 IER5Q5VY09 327 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 ISM2Q6H9L7 571 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 RHPN2Q8IUC4 686 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 DAW1Q8N136 415 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 DNAJB3Q8WWF6 145 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 PSPC1Q8WXF1 523 aaKnown RBP19.54■□□□□ 0.72
CTSB-222ENST00000531551 KIFAP3Q92845 792 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 CCDC47Q96A33 483 aaKnown RBP19.54■□□□□ 0.72
CTSB-222ENST00000531551 ZNF668Q96K58 619 aaPredicted RBP19.54■□□□□ 0.72
CTSB-222ENST00000531551 MAP7D2Q96T17 732 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 PARVGQ9HBI0 331 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 COL4A3BPQ9Y5P4 624 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 B4GALT4O60513 344 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 VTNP04004 478 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 TMEM62Q0P6H9 643 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 MAPK7Q13164 816 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 KMT5BQ4FZB7 885 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 UNC13DQ70J99 1090 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 TNS4Q8IZW8 715 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 PRPF31Q8WWY3 499 aaKnown RBP19.54■□□□□ 0.72
CTSB-222ENST00000531551 EXOC1Q9NV70 894 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 TBC1D7Q9P0N9 293 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 KIAA1468Q9P260 1216 aa19.54■□□□□ 0.72
CTSB-222ENST00000531551 SMIM35A0A1B0GVV1 85 aa19.53■□□□□ 0.72
CTSB-222ENST00000531551 BIN1O00499 593 aa19.53■□□□□ 0.72
CTSB-222ENST00000531551 ARL2P36404 184 aa19.53■□□□□ 0.72
CTSB-222ENST00000531551 CDK7P50613 346 aa19.53■□□□□ 0.72
CTSB-222ENST00000531551 PEX3P56589 373 aa19.53■□□□□ 0.72
CTSB-222ENST00000531551 ODR4Q5SWX8 454 aa19.53■□□□□ 0.72
CTSB-222ENST00000531551 KSR1Q8IVT5 923 aa19.53■□□□□ 0.72
CTSB-222ENST00000531551 KIAA0319LQ8IZA0 1049 aa19.53■□□□□ 0.72
CTSB-222ENST00000531551 HPS3Q969F9 1004 aa19.53■□□□□ 0.72
CTSB-222ENST00000531551 IFT74Q96LB3 600 aa19.53■□□□□ 0.72
CTSB-222ENST00000531551 SEZ6LQ9BYH1 1024 aa19.53■□□□□ 0.72
CTSB-222ENST00000531551 GZF1Q9H116 711 aaPredicted RBP19.53■□□□□ 0.72
CTSB-222ENST00000531551 LARSQ9P2J5 1176 aaKnown RBP19.53■□□□□ 0.72
CTSB-222ENST00000531551 PVALEFA0A1B0GWK0 134 aa19.52■□□□□ 0.72
CTSB-222ENST00000531551 CCDC169A6NNP5 214 aa19.52■□□□□ 0.72
CTSB-222ENST00000531551 KLRC4O43908 158 aa19.52■□□□□ 0.72
CTSB-222ENST00000531551 COASYQ13057 564 aa19.52■□□□□ 0.72
CTSB-222ENST00000531551 TAF2Q6P1X5 1199 aa19.52■□□□□ 0.72
CTSB-222ENST00000531551 CNNM4Q6P4Q7 775 aa19.52■□□□□ 0.72
CTSB-222ENST00000531551 SFR1Q86XK3 245 aa19.52■□□□□ 0.72
CTSB-222ENST00000531551 ASAP3Q8TDY4 903 aa19.52■□□□□ 0.72
CTSB-222ENST00000531551 NLRP4Q96MN2 994 aa19.52■□□□□ 0.72
CTSB-222ENST00000531551 GINS2Q9Y248 185 aa19.52■□□□□ 0.72
CTSB-222ENST00000531551 ATP11BQ9Y2G3 1177 aa19.52■□□□□ 0.72
CTSB-222ENST00000531551 MKI67P46013 3256 aaKnown RBP19.52■□□□□ 0.72
CTSB-222ENST00000531551 SRGAP2CP0DJJ0 459 aa19.52■□□□□ 0.71
CTSB-222ENST00000531551 PLS3P13797 630 aa19.52■□□□□ 0.71
CTSB-222ENST00000531551 GLRA2P23416 452 aa19.52■□□□□ 0.71
CTSB-222ENST00000531551 DMP1Q13316 513 aaPredicted RBP19.52■□□□□ 0.71
CTSB-222ENST00000531551 TRIM60Q495X7 471 aa19.52■□□□□ 0.71
CTSB-222ENST00000531551 SERINC5Q86VE9 423 aa19.52■□□□□ 0.71
CTSB-222ENST00000531551 LINC01465Q8N7H1 131 aa19.52■□□□□ 0.71
CTSB-222ENST00000531551 BSNDQ8WZ55 320 aa19.52■□□□□ 0.71
CTSB-222ENST00000531551 SCLT1Q96NL6 688 aa19.52■□□□□ 0.71
CTSB-222ENST00000531551 KIAA0100Q14667 2235 aaKnown RBP19.51■□□□□ 0.71
CTSB-222ENST00000531551 MROH7Q68CQ1 1323 aa19.51■□□□□ 0.71
CTSB-222ENST00000531551 LRRIQ4A6NIV6 560 aa19.51■□□□□ 0.71
CTSB-222ENST00000531551 GAP43P17677 238 aa19.51■□□□□ 0.71
CTSB-222ENST00000531551 LAMTOR4Q0VGL1 99 aa19.51■□□□□ 0.71
CTSB-222ENST00000531551 FAM126BQ8IXS8 530 aa19.51■□□□□ 0.71
CTSB-222ENST00000531551 GSDMAQ96QA5 445 aa19.51■□□□□ 0.71
CTSB-222ENST00000531551 RMND1Q9NWS8 449 aa19.51■□□□□ 0.71
CTSB-222ENST00000531551 FRMD3A2A2Y4 597 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 TLR3O15455 904 aaKnown RBP19.5■□□□□ 0.71
CTSB-222ENST00000531551 THPOP40225 353 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 ZNF131P52739 623 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 PTK7Q13308 1070 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 MXD4Q14582 209 aaPredicted RBP19.5■□□□□ 0.71
CTSB-222ENST00000531551 RSPH3Q86UC2 560 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 FAM178BQ8IXR5 827 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 RNF149Q8NC42 400 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 NLRP7Q8WX94 980 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 WNT8BQ93098 351 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 CTAGE1Q96RT6 745 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 KIFC3Q9BVG8 833 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 MRPL44Q9H9J2 332 aaKnown RBP19.5■□□□□ 0.71
CTSB-222ENST00000531551 SLC39A2Q9NP94 309 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 KMT5AQ9NQR1 393 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 MAN1B1Q9UKM7 699 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 ARID2Q68CP9 1835 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 LOXHD1Q8IVV2 1947 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 DCDC2CA8MYV0 355 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 CTSHP09668 335 aa19.5■□□□□ 0.71
CTSB-222ENST00000531551 SARSP49591 514 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms