RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 FDXACB1Q9BRP7 624 aaPredicted RBP16.15■□□□□ 0.18
FOXR1-202ENST00000531539 GCOM2Q9BZD3 368 aaPredicted RBP16.15■□□□□ 0.18
FOXR1-202ENST00000531539 DHX33Q9H6R0 707 aaKnown RBP16.15■□□□□ 0.18
FOXR1-202ENST00000531539 STXBP5LQ9Y2K9 1186 aa16.15■□□□□ 0.18
FOXR1-202ENST00000531539 LAMA2P24043 3122 aaKnown RBP16.15■□□□□ 0.18
FOXR1-202ENST00000531539 SZT2Q5T011 3432 aa16.14■□□□□ 0.17
FOXR1-202ENST00000531539 DENND3A2RUS2 1198 aa16.14■□□□□ 0.17
FOXR1-202ENST00000531539 RFXAPO00287 272 aa16.14■□□□□ 0.17
FOXR1-202ENST00000531539 LAD1O00515 517 aa16.14■□□□□ 0.17
FOXR1-202ENST00000531539 SRGAP2CP0DJJ0 459 aa16.14■□□□□ 0.17
FOXR1-202ENST00000531539 DARSP14868 501 aaKnown RBP16.14■□□□□ 0.17
FOXR1-202ENST00000531539 FGFR4P22455 802 aa16.14■□□□□ 0.17
FOXR1-202ENST00000531539 CCT6AP40227 531 aaKnown RBP16.14■□□□□ 0.17
FOXR1-202ENST00000531539 IL17AQ16552 155 aa16.14■□□□□ 0.17
FOXR1-202ENST00000531539 LINC01599Q8WXQ3 324 aa16.14■□□□□ 0.17
FOXR1-202ENST00000531539 ARNTL2Q8WYA1 636 aa16.14■□□□□ 0.17
FOXR1-202ENST00000531539 YME1L1Q96TA2 773 aa16.14■□□□□ 0.17
FOXR1-202ENST00000531539 RAB34Q9BZG1 259 aa16.14■□□□□ 0.17
FOXR1-202ENST00000531539 MGEA5O60502 916 aa16.13■□□□□ 0.17
FOXR1-202ENST00000531539 HSP90AA1P07900 732 aaKnown RBP16.13■□□□□ 0.17
FOXR1-202ENST00000531539 FOSL2P15408 326 aa16.13■□□□□ 0.17
FOXR1-202ENST00000531539 IGFBP4P22692 258 aa16.13■□□□□ 0.17
FOXR1-202ENST00000531539 RPA1P27694 616 aa16.13■□□□□ 0.17
FOXR1-202ENST00000531539 PRPHP41219 470 aa16.13■□□□□ 0.17
FOXR1-202ENST00000531539 HTRA4P83105 476 aaPredicted RBP16.13■□□□□ 0.17
FOXR1-202ENST00000531539 EMC2Q15006 297 aa16.13■□□□□ 0.17
FOXR1-202ENST00000531539 BRAPQ7Z569 592 aa16.13■□□□□ 0.17
FOXR1-202ENST00000531539 SPRED2Q7Z698 418 aa16.13■□□□□ 0.17
FOXR1-202ENST00000531539 TCP11Q8WWU5 503 aa16.13■□□□□ 0.17
FOXR1-202ENST00000531539 NLRP4Q96MN2 994 aa16.13■□□□□ 0.17
FOXR1-202ENST00000531539 GAS2L1Q99501 681 aaPredicted RBP16.13■□□□□ 0.17
FOXR1-202ENST00000531539 MTRQ99707 1265 aa16.13■□□□□ 0.17
FOXR1-202ENST00000531539 TSPYL2Q9H2G4 693 aaPredicted RBP16.13■□□□□ 0.17
FOXR1-202ENST00000531539 LRFN2Q9ULH4 789 aa16.13■□□□□ 0.17
FOXR1-202ENST00000531539 MYO9BQ13459 2157 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 LINC01553A4QN01 128 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 ASAP2O43150 1006 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 STAG3L1P0CL83 205 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 ZSCAN20P17040 1043 aaPredicted RBP16.12■□□□□ 0.17
FOXR1-202ENST00000531539 CDC25AP30304 524 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 RARRES1P49788 294 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 LAMTOR4Q0VGL1 99 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 POTEGQ6S5H5 508 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 MAEAQ7L5Y9 396 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 SPRYD3Q8NCJ5 442 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 PSPC1Q8WXF1 523 aaKnown RBP16.12■□□□□ 0.17
FOXR1-202ENST00000531539 INO80BQ9C086 356 aaPredicted RBP16.12■□□□□ 0.17
FOXR1-202ENST00000531539 RGS18Q9NS28 235 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 MTUS1Q9ULD2 1270 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 KIAA1024Q9UPX6 916 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 PCDHB7Q9Y5E2 793 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 COL4A3BPQ9Y5P4 624 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 STK24Q9Y6E0 443 aa16.12■□□□□ 0.17
FOXR1-202ENST00000531539 PP2D1A8MPX8 630 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 DGAT1O75907 488 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 ATP2C1P98194 919 aaPredicted RBP16.11■□□□□ 0.17
FOXR1-202ENST00000531539 ZRSR1Q15695 479 aaKnown RBP16.11■□□□□ 0.17
FOXR1-202ENST00000531539 ECM1Q16610 540 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 KRT79Q5XKE5 535 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 HAUS3Q68CZ6 603 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 FAM43BQ6ZT52 329 aaPredicted RBP16.11■□□□□ 0.17
FOXR1-202ENST00000531539 SLC24A5Q71RS6 500 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 ZNF410Q86VK4 478 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 IGSF22Q8N9C0 903 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 SNX29Q8TEQ0 813 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 TGS1Q96RS0 853 aaKnown RBP16.11■□□□□ 0.17
FOXR1-202ENST00000531539 ATP6V0A4Q9HBG4 840 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 XPNPEP1Q9NQW7 623 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 C1orf112Q9NSG2 853 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 DBR1Q9UK59 544 aaKnown RBP16.11■□□□□ 0.17
FOXR1-202ENST00000531539 GBF1Q92538 1859 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 LOXHD1Q8IVV2 1947 aa16.11■□□□□ 0.17
FOXR1-202ENST00000531539 ARHGEF35A5YM69 484 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 VWA3AA6NCI4 1184 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 EPOPA6NHQ4 379 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 GAS2O43903 313 aaKnown RBP16.1■□□□□ 0.17
FOXR1-202ENST00000531539 USO1O60763 962 aaKnown RBP16.1■□□□□ 0.17
FOXR1-202ENST00000531539 SARSP49591 514 aaKnown RBP16.1■□□□□ 0.17
FOXR1-202ENST00000531539 ERVK-21P61565 698 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 ADGRE1Q14246 886 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 DSC3Q14574 896 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 SF3A1Q15459 793 aaKnown RBP16.1■□□□□ 0.17
FOXR1-202ENST00000531539 FAM173BQ6P4H8 233 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 CATSPER4Q7RTX7 472 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 NPAS4Q8IUM7 802 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 FIBCD1Q8N539 461 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 PPM1EQ8WY54 764 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 DDX19AQ9NUU7 478 aaKnown RBP16.1■□□□□ 0.17
FOXR1-202ENST00000531539 MICAL3Q7RTP6 2002 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 SIP14410 1827 aa16.1■□□□□ 0.17
FOXR1-202ENST00000531539 C9IYK1 514 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 STX6O43752 255 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 DGKIO75912 1065 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 MUTP22033 750 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 SFPQP23246 707 aaKnown RBP eCLIP16.09■□□□□ 0.17
FOXR1-202ENST00000531539 FAM189BP81408 668 aa16.09■□□□□ 0.17
FOXR1-202ENST00000531539 BTG3Q14201 252 aaPredicted RBP16.09■□□□□ 0.17
FOXR1-202ENST00000531539 MXD4Q14582 209 aaPredicted RBP16.09■□□□□ 0.17
FOXR1-202ENST00000531539 ARL6IP4Q66PJ3 421 aaKnown RBP16.09■□□□□ 0.17
FOXR1-202ENST00000531539 PADI6Q6TGC4 694 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms