RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ALKQ9UM73 1620 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 RASSF10A6NK89 507 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 TRAF5O00463 557 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 B4GALT3O60512 393 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 KRT37O76014 449 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 JMJD7P0C870 316 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 NFATC3Q12968 1075 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 TMEM132BQ14DG7 1078 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 KLHL36Q8N4N3 616 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 ASB15Q8WXK1 588 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 INCENPQ9NQS7 918 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 UCKL1Q9NWZ5 548 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 GALNT8Q9NY28 637 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 MAGEC2Q9UBF1 373 aaPredicted RBP9.87□□□□□ -0.83
CSDE1-213ENST00000530784 ZDHHC9Q9Y397 364 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 ANKRD30AQ9BXX3 1397 aa9.87□□□□□ -0.83
CSDE1-213ENST00000530784 H0Y858 1186 aa9.86□□□□□ -0.83
CSDE1-213ENST00000530784 FOXP2O15409 715 aa9.86□□□□□ -0.83
CSDE1-213ENST00000530784 HIP1RO75146 1068 aa9.86□□□□□ -0.83
CSDE1-213ENST00000530784 CDC45O75419 566 aa9.86□□□□□ -0.83
CSDE1-213ENST00000530784 MPIG6BO95866 241 aa9.86□□□□□ -0.83
CSDE1-213ENST00000530784 ARHGAP44Q17R89 818 aa9.86□□□□□ -0.83
CSDE1-213ENST00000530784 CDCA2Q69YH5 1023 aaPredicted RBP9.86□□□□□ -0.83
CSDE1-213ENST00000530784 CHST14Q8NCH0 376 aa9.86□□□□□ -0.83
CSDE1-213ENST00000530784 GBP4Q96PP9 640 aa9.86□□□□□ -0.83
CSDE1-213ENST00000530784 BDH2Q9BUT1 245 aa9.86□□□□□ -0.83
CSDE1-213ENST00000530784 BARX1Q9HBU1 254 aaPredicted RBP9.86□□□□□ -0.83
CSDE1-213ENST00000530784 PIK3C2BO00750 1634 aa9.85□□□□□ -0.83
CSDE1-213ENST00000530784 SYN1P17600 705 aa9.85□□□□□ -0.83
CSDE1-213ENST00000530784 FLT3P36888 993 aa9.85□□□□□ -0.83
CSDE1-213ENST00000530784 CFAP100Q494V2 611 aa9.85□□□□□ -0.83
CSDE1-213ENST00000530784 Q6ZUG5 572 aa9.85□□□□□ -0.83
CSDE1-213ENST00000530784 UBE2R2Q712K3 238 aaPredicted RBP9.85□□□□□ -0.83
CSDE1-213ENST00000530784 NOP9Q86U38 636 aaKnown RBP9.85□□□□□ -0.83
CSDE1-213ENST00000530784 WNK4Q96J92 1243 aa9.85□□□□□ -0.83
CSDE1-213ENST00000530784 AMNQ9BXJ7 453 aa9.85□□□□□ -0.83
CSDE1-213ENST00000530784 INTS7Q9NVH2 962 aaKnown RBP9.85□□□□□ -0.83
CSDE1-213ENST00000530784 EID1Q9Y6B2 187 aa9.85□□□□□ -0.83
CSDE1-213ENST00000530784 LMTK2Q8IWU2 1503 aa9.85□□□□□ -0.83
CSDE1-213ENST00000530784 STRCP1A6NGW2 1772 aa9.85□□□□□ -0.83
CSDE1-213ENST00000530784 EFCAB6Q5THR3 1501 aa9.84□□□□□ -0.83
CSDE1-213ENST00000530784 PTPDC1A2A3K4 754 aa9.84□□□□□ -0.83
CSDE1-213ENST00000530784 SDHAP31040 664 aa9.84□□□□□ -0.83
CSDE1-213ENST00000530784 CATSPEREQ5SY80 951 aa9.84□□□□□ -0.83
CSDE1-213ENST00000530784 LRSAM1Q6UWE0 723 aa9.84□□□□□ -0.83
CSDE1-213ENST00000530784 DPP8Q6V1X1 898 aaPredicted RBP9.84□□□□□ -0.83
CSDE1-213ENST00000530784 KBTBD2Q8IY47 623 aa9.84□□□□□ -0.83
CSDE1-213ENST00000530784 NINJ1Q92982 152 aa9.84□□□□□ -0.83
CSDE1-213ENST00000530784 CABP5Q9NP86 173 aa9.84□□□□□ -0.83
CSDE1-213ENST00000530784 ADAM29Q9UKF5 820 aa9.84□□□□□ -0.83
CSDE1-213ENST00000530784 TMEM2Q9UHN6 1383 aa9.84□□□□□ -0.83
CSDE1-213ENST00000530784 PRAMEF22A3QJZ6 481 aa9.83□□□□□ -0.84
CSDE1-213ENST00000530784 B8ZZF3 427 aa9.83□□□□□ -0.84
CSDE1-213ENST00000530784 CBX4O00257 560 aa9.83□□□□□ -0.84
CSDE1-213ENST00000530784 DVL2O14641 736 aa9.83□□□□□ -0.84
CSDE1-213ENST00000530784 IL13RA1P78552 427 aa9.83□□□□□ -0.84
CSDE1-213ENST00000530784 HIPK4Q8NE63 616 aa9.83□□□□□ -0.84
CSDE1-213ENST00000530784 SKOR2Q2VWA4 1001 aaPredicted RBP9.82□□□□□ -0.84
CSDE1-213ENST00000530784 TBC1D10BQ4KMP7 808 aaPredicted RBP9.82□□□□□ -0.84
CSDE1-213ENST00000530784 CC2D1AQ6P1N0 951 aaPredicted RBP9.82□□□□□ -0.84
CSDE1-213ENST00000530784 DHX37Q8IY37 1157 aaKnown RBP9.82□□□□□ -0.84
CSDE1-213ENST00000530784 AJUBAQ96IF1 538 aa9.82□□□□□ -0.84
CSDE1-213ENST00000530784 B4GALT6Q9UBX8 382 aa9.82□□□□□ -0.84
CSDE1-213ENST00000530784 TBX22Q9Y458 520 aa9.82□□□□□ -0.84
CSDE1-213ENST00000530784 ASB1Q9Y576 335 aa9.82□□□□□ -0.84
CSDE1-213ENST00000530784 ADGRL2O95490 1459 aa9.82□□□□□ -0.84
CSDE1-213ENST00000530784 KDM5AP29375 1690 aaKnown RBP9.82□□□□□ -0.84
CSDE1-213ENST00000530784 ADGRB3O60242 1522 aa9.82□□□□□ -0.84
CSDE1-213ENST00000530784 FAM83GA6ND36 823 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 GOLGA6L22H0YM25 854 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 B4GALT4O60513 344 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 CELA3BP08861 270 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 ECE1P42892 770 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 KIF11P52732 1056 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 PLP2Q04941 152 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 WDR72Q3MJ13 1102 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 ERICH6BQ5W0A0 696 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 LRRTM3Q86VH5 581 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 NIM1KQ8IY84 436 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 ERCC4Q92889 916 aaPredicted RBP9.81□□□□□ -0.84
CSDE1-213ENST00000530784 FEZ1Q99689 392 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 BTBD2Q9BX70 525 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 KATNBL1Q9H079 304 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 NOS1P29475 1434 aa9.81□□□□□ -0.84
CSDE1-213ENST00000530784 PRRG2O14669 202 aa9.8□□□□□ -0.84
CSDE1-213ENST00000530784 PLATP00750 562 aa9.8□□□□□ -0.84
CSDE1-213ENST00000530784 CSF2RBP32927 897 aa9.8□□□□□ -0.84
CSDE1-213ENST00000530784 STILQ15468 1287 aa9.8□□□□□ -0.84
CSDE1-213ENST00000530784 DALRD3Q5D0E6 543 aaKnown RBP9.8□□□□□ -0.84
CSDE1-213ENST00000530784 CNNM4Q6P4Q7 775 aa9.8□□□□□ -0.84
CSDE1-213ENST00000530784 GPR155Q7Z3F1 870 aa9.8□□□□□ -0.84
CSDE1-213ENST00000530784 MTFR1LQ9H019 292 aa9.8□□□□□ -0.84
CSDE1-213ENST00000530784 NCANO14594 1321 aa9.8□□□□□ -0.84
CSDE1-213ENST00000530784 KPNA6O60684 536 aa9.79□□□□□ -0.84
CSDE1-213ENST00000530784 POLD1P28340 1107 aa9.79□□□□□ -0.84
CSDE1-213ENST00000530784 ADCY8P40145 1251 aa9.79□□□□□ -0.84
CSDE1-213ENST00000530784 NEK4P51957 841 aa9.79□□□□□ -0.84
CSDE1-213ENST00000530784 TOP3AQ13472 1001 aaPredicted RBP9.79□□□□□ -0.84
CSDE1-213ENST00000530784 IDI1Q13907 227 aa9.79□□□□□ -0.84
CSDE1-213ENST00000530784 FAM50AQ14320 339 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms