RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 TUBGCP5Q96RT8 1024 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 CUEDC2Q9H467 287 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 SLITRK6Q9H5Y7 841 aa15.25■□□□□ 0.03
PCF11-204ENST00000530660 PRKAB2O43741 272 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 LYNP07948 512 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 XBP1P17861 261 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 NPY5RQ15761 445 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 SLC18A3Q16572 532 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 LONRF1Q17RB8 773 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 DSTYKQ6XUX3 929 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 CCDC84Q86UT8 332 aaPredicted RBP15.24■□□□□ 0.03
PCF11-204ENST00000530660 SMC1BQ8NDV3 1235 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 HAPLN3Q96S86 360 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 SEC63Q9UGP8 760 aaKnown RBP15.24■□□□□ 0.03
PCF11-204ENST00000530660 GMEB1Q9Y692 573 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 ADAMTS7Q9UKP4 1686 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 PARP4Q9UKK3 1724 aaKnown RBP15.24■□□□□ 0.03
PCF11-204ENST00000530660 T-ENOLP0DO92 83 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 GIT2Q14161 759 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 METTL24Q5JXM2 366 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 RNF43Q68DV7 783 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 TAOK1Q7L7X3 1001 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 ARMT1Q9H993 441 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 LUC7LQ9NQ29 371 aaKnown RBP15.24■□□□□ 0.03
PCF11-204ENST00000530660 CHKBQ9Y259 395 aa15.24■□□□□ 0.03
PCF11-204ENST00000530660 TMEM221A6NGB7 291 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 CAPN9O14815 690 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 FGGP02679 453 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 ZBTB48P10074 688 aaPredicted RBP15.23■□□□□ 0.03
PCF11-204ENST00000530660 POLR2FP61218 127 aaKnown RBP15.23■□□□□ 0.03
PCF11-204ENST00000530660 POU5F1Q01860 360 aaKnown RBP15.23■□□□□ 0.03
PCF11-204ENST00000530660 UBE3CQ15386 1083 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 WASHC2DQ5SRD0 308 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 VSTM1Q6UX27 236 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 RNF168Q8IYW5 571 aaPredicted RBP15.23■□□□□ 0.03
PCF11-204ENST00000530660 TNFRSF25Q93038 417 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 DHX36Q9H2U1 1008 aaKnown RBP15.23■□□□□ 0.03
PCF11-204ENST00000530660 KANSL2Q9H9L4 492 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 SUGT1Q9Y2Z0 365 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 FER1L4A9Z1Z3 1794 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 SERPING1P05155 500 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 CCDC152Q4G0S7 254 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 LIN52Q52LA3 116 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 CYB5RLQ6IPT4 315 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 ARHGEF2Q92974 986 aaKnown RBP15.23■□□□□ 0.03
PCF11-204ENST00000530660 CLMNQ96JQ2 1002 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 PYM1Q9BRP8 204 aaKnown RBP15.23■□□□□ 0.03
PCF11-204ENST00000530660 PLEKHA8P1O95397 391 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 ASLP04424 464 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 ITGA2BP08514 1039 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 OCRLQ01968 901 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 PRPF4BQ13523 1007 aaKnown RBP15.23■□□□□ 0.03
PCF11-204ENST00000530660 RAPGEF1Q13905 1077 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 FAM83BQ5T0W9 1011 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 LRRC74BQ6ZQY2 392 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 FAM133AQ8N9E0 248 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 CKAP2Q8WWK9 683 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 SPIRE2Q8WWL2 714 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 FAM89AQ96GI7 184 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 TUBGCP4Q9UGJ1 667 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 FBXO3Q9UK99 471 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 SLC4A7Q9Y6M7 1214 aa15.23■□□□□ 0.03
PCF11-204ENST00000530660 TCRBV5S4A2TA0A5A2 114 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 CES2O00748 559 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 TBX10O75333 385 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 WDR72Q3MJ13 1102 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 PTF1AQ7RTS3 328 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 PEX26Q7Z412 305 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 ANKLE2Q86XL3 938 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 RIBC1Q8N443 379 aaPredicted RBP15.22■□□□□ 0.03
PCF11-204ENST00000530660 LRRC57Q8N9N7 239 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 ATP6V0A2Q9Y487 856 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 TJP1Q07157 1748 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 PKD1L3Q7Z443 1732 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 FAM196BA6NMK8 535 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 PAX3P23760 479 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 ERFP50548 548 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 CABP4P57796 275 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 ASIC1P78348 528 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 DR1Q01658 176 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 TTLL12Q14166 644 aaPredicted RBP15.22■□□□□ 0.03
PCF11-204ENST00000530660 TNIP1Q15025 636 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 SETDB1Q15047 1291 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 MAN2A1Q16706 1144 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 DUPD1Q68J44 220 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 ZDHHC24Q6UX98 284 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 IFNL2Q8IZJ0 200 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 ARHGAP18Q8N392 663 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 LRRC37BQ96QE4 947 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 ERP44Q9BS26 406 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 COMMD3-BMI1R4GMX3 469 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 MROH7Q68CQ1 1323 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 MAGEB3O15480 346 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 NOL4O94818 638 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 TATP17735 454 aaPredicted RBP15.22■□□□□ 0.03
PCF11-204ENST00000530660 CYP11B2P19099 503 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 NLRP5P59047 1200 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 SYNE4Q8N205 404 aa15.22■□□□□ 0.03
PCF11-204ENST00000530660 NMD3Q96D46 503 aaKnown RBP15.22■□□□□ 0.03
PCF11-204ENST00000530660 RNF26Q9BY78 433 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms