RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 EPHA7Q15375 998 aa6.31□□□□□ -1.4
C11orf88-204ENST00000529661 DHCR24Q15392 516 aa6.31□□□□□ -1.4
C11orf88-204ENST00000529661 TTC38Q5R3I4 469 aa6.31□□□□□ -1.4
C11orf88-204ENST00000529661 ESRP1Q6NXG1 681 aaKnown RBP6.31□□□□□ -1.4
C11orf88-204ENST00000529661 NME9Q86XW9 330 aa6.31□□□□□ -1.4
C11orf88-204ENST00000529661 KIF18BQ86Y91 864 aa6.31□□□□□ -1.4
C11orf88-204ENST00000529661 GIMAP8Q8ND71 665 aaPredicted RBP6.31□□□□□ -1.4
C11orf88-204ENST00000529661 CHTF18Q8WVB6 975 aa6.31□□□□□ -1.4
C11orf88-204ENST00000529661 MAML3Q96JK9 1138 aa6.31□□□□□ -1.4
C11orf88-204ENST00000529661 C16orf92Q96LL3 132 aa6.31□□□□□ -1.4
C11orf88-204ENST00000529661 HOMER2Q9NSB8 354 aa6.31□□□□□ -1.4
C11orf88-204ENST00000529661 ALG1L2C9J202 215 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 APOL3O95236 402 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 ADRB1P08588 477 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 SCNN1BP51168 640 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 EVA1CP58658 441 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 ICAM4Q14773 271 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 SEPT7Q16181 437 aaKnown RBP6.3□□□□□ -1.4
C11orf88-204ENST00000529661 TBR1Q16650 682 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 PLEKHG6Q3KR16 790 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 AGBL4Q5VU57 503 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 TRIM68Q6AZZ1 485 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 C7orf31Q8N865 590 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 GPR101Q96P66 508 aaPredicted RBP6.3□□□□□ -1.4
C11orf88-204ENST00000529661 DPYSL5Q9BPU6 564 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 C12orf65Q9H3J6 166 aaKnown RBP6.3□□□□□ -1.4
C11orf88-204ENST00000529661 MCM8Q9UJA3 840 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 PHLDB1Q86UU1 1377 aa6.3□□□□□ -1.4
C11orf88-204ENST00000529661 ARHGAP6O43182 974 aa6.29□□□□□ -1.4
C11orf88-204ENST00000529661 CPEP16870 476 aa6.29□□□□□ -1.4
C11orf88-204ENST00000529661 KPNA1P52294 538 aaPredicted RBP6.29□□□□□ -1.4
C11orf88-204ENST00000529661 EXOSC10Q01780 885 aaKnown RBP6.29□□□□□ -1.4
C11orf88-204ENST00000529661 USP30Q70CQ3 517 aa6.29□□□□□ -1.4
C11orf88-204ENST00000529661 TAX1BP1Q86VP1 789 aa6.29□□□□□ -1.4
C11orf88-204ENST00000529661 TTC9BQ8N6N2 239 aa6.29□□□□□ -1.4
C11orf88-204ENST00000529661 OR5AN1Q8NGI8 311 aa6.29□□□□□ -1.4
C11orf88-204ENST00000529661 OR14K1Q8NGZ2 314 aa6.29□□□□□ -1.4
C11orf88-204ENST00000529661 OR2W6PQ8NHA6 318 aa6.29□□□□□ -1.4
C11orf88-204ENST00000529661 RTF1Q92541 710 aaKnown RBP6.29□□□□□ -1.4
C11orf88-204ENST00000529661 OR10A2Q9H208 303 aa6.29□□□□□ -1.4
C11orf88-204ENST00000529661 POFUT1Q9H488 388 aa6.29□□□□□ -1.4
C11orf88-204ENST00000529661 OAZ3Q9UMX2 235 aa6.29□□□□□ -1.4
C11orf88-204ENST00000529661 WASHC2CQ9Y4E1 1318 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 CDC14BO60729 498 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 IL2P60568 153 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 ADAM17P78536 824 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 ADCY1Q08828 1119 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 MYBPC3Q14896 1274 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 TIGD7Q6NT04 549 aaPredicted RBP6.28□□□□□ -1.4
C11orf88-204ENST00000529661 TCTN3Q6NUS6 607 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 PASD1Q8IV76 773 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 EFHBQ8N7U6 833 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 SMC1BQ8NDV3 1235 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 ATL2Q8NHH9 583 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 GPR20Q99678 358 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 DEF6Q9H4E7 631 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 ZMAT4Q9H898 229 aa6.28□□□□□ -1.4
C11orf88-204ENST00000529661 SAE1Q9UBE0 346 aaPredicted RBP6.28□□□□□ -1.4
C11orf88-204ENST00000529661 PUF60Q9UHX1 559 aaKnown RBP6.28□□□□□ -1.4
C11orf88-204ENST00000529661 ZEB2O60315 1214 aa6.27□□□□□ -1.41
C11orf88-204ENST00000529661 BRINP1O60477 761 aa6.27□□□□□ -1.41
C11orf88-204ENST00000529661 MAFO75444 373 aaPredicted RBP6.27□□□□□ -1.41
C11orf88-204ENST00000529661 CR2P20023 1033 aa6.27□□□□□ -1.41
C11orf88-204ENST00000529661 STRN3Q13033 797 aa6.27□□□□□ -1.41
C11orf88-204ENST00000529661 ADAM15Q13444 863 aa6.27□□□□□ -1.41
C11orf88-204ENST00000529661 DGKDQ16760 1214 aa6.27□□□□□ -1.41
C11orf88-204ENST00000529661 BRDTQ58F21 947 aaPredicted RBP6.27□□□□□ -1.41
C11orf88-204ENST00000529661 ZNF585AQ6P3V2 769 aa6.27□□□□□ -1.41
C11orf88-204ENST00000529661 PHYKPLQ8IUZ5 450 aa6.27□□□□□ -1.41
C11orf88-204ENST00000529661 ZZZ3Q8IYH5 903 aa6.27□□□□□ -1.41
C11orf88-204ENST00000529661 BCL6BQ8N143 479 aaPredicted RBP6.27□□□□□ -1.41
C11orf88-204ENST00000529661 RPGRQ92834 1020 aaKnown RBP6.27□□□□□ -1.41
C11orf88-204ENST00000529661 MYL10Q9BUA6 226 aa6.27□□□□□ -1.41
C11orf88-204ENST00000529661 KCMF1Q9P0J7 381 aa6.27□□□□□ -1.41
C11orf88-204ENST00000529661 PATE3B3GLJ2 98 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 FOXS1O43638 330 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 MARCH6O60337 910 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 ZNF623O75123 536 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 PRPF6O94906 941 aaKnown RBP6.26□□□□□ -1.41
C11orf88-204ENST00000529661 ZNF20P17024 532 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 BPIP17213 487 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 ANTXR2P58335 489 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 SMAD3P84022 425 aaKnown RBP6.26□□□□□ -1.41
C11orf88-204ENST00000529661 OCRLQ01968 901 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 ADCY2Q08462 1091 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 NFYCQ13952 458 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 RNF219Q5W0B1 726 aaPredicted RBP6.26□□□□□ -1.41
C11orf88-204ENST00000529661 DNERQ8NFT8 737 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 WDR66Q8TBY9 1149 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 DVL3Q92997 716 aaPredicted RBP6.26□□□□□ -1.41
C11orf88-204ENST00000529661 OR14A2Q96R54 314 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 CD248Q9HCU0 757 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 SPTLC3Q9NUV7 552 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 KLHL42Q9P2K6 505 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 DENND2AQ9ULE3 1009 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 ZFR2Q9UPR6 939 aaKnown RBP6.26□□□□□ -1.41
C11orf88-204ENST00000529661 TCAF1Q9Y4C2 921 aa6.26□□□□□ -1.41
C11orf88-204ENST00000529661 MATN2O00339 956 aa6.25□□□□□ -1.41
C11orf88-204ENST00000529661 GPR39O43194 453 aa6.25□□□□□ -1.41
C11orf88-204ENST00000529661 TGM5O43548 720 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms