RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 FRMD7Q6ZUT3 714 aa6.53□□□□□ -1.36
CD44-230ENST00000528922 WDR48Q8TAF3 677 aa6.53□□□□□ -1.36
CD44-230ENST00000528922 USP36Q9P275 1121 aaKnown RBP6.53□□□□□ -1.36
CD44-230ENST00000528922 FTSJ1Q9UET6 329 aa6.53□□□□□ -1.36
CD44-230ENST00000528922 NOP58Q9Y2X3 529 aaKnown RBP6.53□□□□□ -1.36
CD44-230ENST00000528922 NOC2LQ9Y3T9 749 aaKnown RBP6.53□□□□□ -1.36
CD44-230ENST00000528922 CTTNBP2Q8WZ74 1663 aa6.53□□□□□ -1.36
CD44-230ENST00000528922 DNMBPQ6XZF7 1577 aa6.53□□□□□ -1.36
CD44-230ENST00000528922 CCER2I3L3R5 266 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 KDM1AO60341 852 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 RAB11FIP3O75154 756 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 APOL3O95236 402 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 MOGSQ13724 837 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 RGL3Q3MIN7 710 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 FAM26FQ5R3K3 315 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 ZBTB41Q5SVQ8 909 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 TIGD7Q6NT04 549 aaPredicted RBP6.52□□□□□ -1.37
CD44-230ENST00000528922 CMIPQ8IY22 773 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 RPUSD2Q8IZ73 545 aaKnown RBP6.52□□□□□ -1.37
CD44-230ENST00000528922 SYT8Q8NBV8 401 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 MBD6Q96DN6 1003 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 TRIM8Q9BZR9 551 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 TMEM168Q9H0V1 697 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 SLC5A4Q9NY91 659 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 FGD5Q6ZNL6 1462 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 CASKIN1Q8WXD9 1431 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 ABCA10Q8WWZ4 1543 aa6.52□□□□□ -1.37
CD44-230ENST00000528922 NOBOXO60393 691 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 CYP1A1P04798 512 aaPredicted RBP6.51□□□□□ -1.37
CD44-230ENST00000528922 NCLP19338 710 aaKnown RBP6.51□□□□□ -1.37
CD44-230ENST00000528922 IBSPP21815 317 aaPredicted RBP6.51□□□□□ -1.37
CD44-230ENST00000528922 POLD1P28340 1107 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 KCNC1P48547 511 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 JAG1P78504 1218 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 ADCY2Q08462 1091 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 TOP3AQ13472 1001 aaPredicted RBP6.51□□□□□ -1.37
CD44-230ENST00000528922 FAM50AQ14320 339 aaKnown RBP6.51□□□□□ -1.37
CD44-230ENST00000528922 LCE3BQ5TA77 95 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 KIAA1841Q6NSI8 718 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 Q6ZUG5 572 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 ESPNLQ6ZVH7 1005 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 CXorf67Q86X51 503 aaPredicted RBP6.51□□□□□ -1.37
CD44-230ENST00000528922 SIAH1Q8IUQ4 282 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 BCL6BQ8N143 479 aaPredicted RBP6.51□□□□□ -1.37
CD44-230ENST00000528922 MARCH10Q8NA82 808 aaPredicted RBP6.51□□□□□ -1.37
CD44-230ENST00000528922 ANO3Q9BYT9 981 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 LUC7LQ9NQ29 371 aaKnown RBP6.51□□□□□ -1.37
CD44-230ENST00000528922 MAGEL2Q9UJ55 1249 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 CDC42EP3Q9UKI2 254 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 SNAPC4Q5SXM2 1469 aa6.51□□□□□ -1.37
CD44-230ENST00000528922 PRSS38A1L453 326 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 C9orf118A6NHY6 69 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 MAFO75444 373 aaPredicted RBP6.5□□□□□ -1.37
CD44-230ENST00000528922 BMP7P18075 431 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 ANTXR2P58335 489 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 NFATC3Q12968 1075 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 TMEM200BQ69YZ2 307 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 GRAMD4Q6IC98 578 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 OTOP2Q7RTS6 562 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 AJUBAQ96IF1 538 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 KATNBL1Q9H079 304 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 RAB3GAP2Q9H2M9 1393 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 PCF11O94913 1555 aaKnown RBP6.5□□□□□ -1.37
CD44-230ENST00000528922 hCG_2014768A0A024R1R8 64 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 A0A0G2JNJ9 132 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 CLEC2LP0C7M8 214 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 KCNQ1P51787 676 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 GUCY2FP51841 1108 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 MANFP55145 182 aaKnown RBP6.5□□□□□ -1.37
CD44-230ENST00000528922 EIF4HQ15056 248 aaKnown RBP6.5□□□□□ -1.37
CD44-230ENST00000528922 NT5DC1Q5TFE4 455 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 NECAB2Q7Z6G3 386 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 KLHL36Q8N4N3 616 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 LCORQ96JN0 433 aaPredicted RBP6.5□□□□□ -1.37
CD44-230ENST00000528922 KCNC2Q96PR1 638 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 MTG2Q9H4K7 406 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 Q9UFV3 132 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 FBXO10Q9UK96 956 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 ADAM29Q9UKF5 820 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 TMPRSS11EQ9UL52 423 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 DENND2AQ9ULE3 1009 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 ZDHHC9Q9Y397 364 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 PPP2R3BQ9Y5P8 575 aa6.5□□□□□ -1.37
CD44-230ENST00000528922 MROH6A6NGR9 719 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 ANP32CO43423 234 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 KATNA1O75449 491 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 CSF2RBP32927 897 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 ETV4P43268 484 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 BCAR1P56945 870 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 SCAND1P57086 179 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 ERVK-21P61565 698 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 LARP4Q71RC2 724 aaKnown RBP eCLIP6.49□□□□□ -1.37
CD44-230ENST00000528922 LYSMD2Q8IV50 215 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 CNTD1Q8N815 330 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 FEZF2Q8TBJ5 459 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 LMBR1Q8WVP7 490 aa6.49□□□□□ -1.37
CD44-230ENST00000528922 AHCYL2Q96HN2 611 aaKnown RBP6.49□□□□□ -1.37
CD44-230ENST00000528922 PITHD1Q9GZP4 211 aaPredicted RBP6.49□□□□□ -1.37
CD44-230ENST00000528922 PUS7LQ9H0K6 701 aaKnown RBP6.49□□□□□ -1.37
CD44-230ENST00000528922 PRDM12Q9H4Q4 367 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms