RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 C1orf186Q6ZWK4 172 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 UNC13DQ70J99 1090 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 TRMT1LQ7Z2T5 733 aaKnown RBP8.77□□□□□ -1.01
SSBP3-211ENST00000528787 SRGAP1Q7Z6B7 1085 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 FAM126BQ8IXS8 530 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 RPUSD2Q8IZ73 545 aaKnown RBP8.77□□□□□ -1.01
SSBP3-211ENST00000528787 DEPTORQ8TB45 409 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 SPIRE2Q8WWL2 714 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 RSPH1Q8WYR4 309 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 DDX12PQ92771 950 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 APBB2Q92870 758 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 SMARCE1Q969G3 411 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 HVCN1Q96D96 273 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 PRIMPOLQ96LW4 560 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 NUP62CLQ9H1M0 184 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 OLFML3Q9NRN5 406 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 EXOC1Q9NV70 894 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 SETD4Q9NVD3 440 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 DACT1Q9NYF0 836 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 SUCLA2Q9P2R7 463 aaPredicted RBP8.77□□□□□ -1.01
SSBP3-211ENST00000528787 PCDHB13Q9Y5F0 798 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 TRIP12Q14669 1992 aaPredicted RBP8.77□□□□□ -1.01
SSBP3-211ENST00000528787 UBE4BO95155 1302 aa8.77□□□□□ -1.01
SSBP3-211ENST00000528787 GPR182O15218 404 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 PQBP1O60828 265 aaKnown RBP8.76□□□□□ -1.01
SSBP3-211ENST00000528787 ERLIN2O94905 339 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 STBD1O95210 358 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 CAVIN2O95810 425 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 CD4P01730 458 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 SKIP12755 728 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 IDEP14735 1019 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 SELPP16109 830 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 AXLP30530 894 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 ZNF131P52739 623 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 CRYBB1P53674 252 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-211ENST00000528787 NPEPPSP55786 919 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 PSMC6P62333 389 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 ADAM17P78536 824 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 MRPS6P82932 125 aaKnown RBP8.76□□□□□ -1.01
SSBP3-211ENST00000528787 DHX8Q14562 1220 aaKnown RBP8.76□□□□□ -1.01
SSBP3-211ENST00000528787 KCNB1Q14721 858 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 MAPK6Q16659 721 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 KYAT1Q16773 422 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 HERC4Q5GLZ8 1057 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-211ENST00000528787 CCDC183Q5T5S1 534 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 PLA2G4FQ68DD2 849 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 GDF6Q6KF10 455 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-211ENST00000528787 USP49Q70CQ1 688 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 FAM178BQ8IXR5 827 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 HACE1Q8IYU2 909 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 TMEM199Q8N511 208 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 MYCT1Q8N699 235 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 ENGASEQ8NFI3 743 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 GOLGA5Q8TBA6 731 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 NLRP7Q8WX94 980 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 KCNN1Q92952 543 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 PAGE5Q96GU1 130 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 PLIN2Q99541 437 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 FTHL17Q9BXU8 183 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 PANK2Q9BZ23 570 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 TRIM9Q9C026 710 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 MTIF3Q9H2K0 278 aaKnown RBP8.76□□□□□ -1.01
SSBP3-211ENST00000528787 TMEM206Q9H813 350 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 KMT5AQ9NQR1 393 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 BLOC1S4Q9NUP1 217 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 TMEM39AQ9NV64 488 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 PANK4Q9NVE7 773 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 PRMT7Q9NVM4 692 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-211ENST00000528787 CGNQ9P2M7 1197 aaKnown RBP8.76□□□□□ -1.01
SSBP3-211ENST00000528787 SERTAD1Q9UHV2 236 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 ATP11BQ9Y2G3 1177 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.76□□□□□ -1.01
SSBP3-211ENST00000528787 TRPV2Q9Y5S1 764 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 HTTP42858 3142 aa8.76□□□□□ -1.01
SSBP3-211ENST00000528787 CCDC169A6NNP5 214 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 RSPH10B2B2RC85 870 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 ZBTB42B2RXF5 422 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 K7ERI5 159 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 KIAA0391O15091 583 aaKnown RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 TREHO43280 583 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 ACTN4O43707 911 aaKnown RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 TRAK2O60296 914 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 HIP1RO75146 1068 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 NR1I2O75469 434 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 RSPH10BP0C881 870 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 ACTN1P12814 892 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 EN2P19622 333 aaPredicted RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 ARL2P36404 184 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 THPOP40225 353 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 ATN1P54259 1190 aaPredicted RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 LAMTOR4Q0VGL1 99 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 SNW1Q13573 536 aaKnown RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 LONRF3Q496Y0 759 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 NAALADL2Q58DX5 795 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 FAM26DQ5JW98 314 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 SASS6Q6UVJ0 657 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 IFNLR1Q8IU57 520 aaPredicted RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 RHPN2Q8IUC4 686 aa8.75□□□□□ -1.01
SSBP3-211ENST00000528787 PRPF31Q8WWY3 499 aaKnown RBP8.75□□□□□ -1.01
SSBP3-211ENST00000528787 CCDC51Q96ER9 411 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms