RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 SMNDC1O75940 238 aaKnown RBP eCLIP15.86■□□□□ 0.13
CAPN1-214ENST00000528165 OAS1P00973 400 aaKnown RBP15.86■□□□□ 0.13
CAPN1-214ENST00000528165 ABCB4P21439 1286 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 JAM2P57087 298 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 BNIP1Q12981 228 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 CDCA2Q69YH5 1023 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-214ENST00000528165 C3orf67Q6ZVT6 689 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 EYA3Q99504 573 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 TMEM109Q9BVC6 243 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 FGFR1OP2Q9NVK5 253 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 GCNT4Q9P109 453 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 PARP2Q9UGN5 583 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 AJAP1Q9UKB5 411 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-214ENST00000528165 KRT16P08779 473 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 FGFR4P22455 802 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 GBP1P32455 592 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 ATP11AP98196 1134 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 PLS1Q14651 629 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 EPHA7Q15375 998 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 CCDC38Q502W7 563 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 ERICH1Q86X53 443 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 SPICE1Q8N0Z3 855 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 TGFBRAP1Q8WUH2 860 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 CNKSR1Q969H4 720 aa15.86■□□□□ 0.13
CAPN1-214ENST00000528165 SAP30BPQ9UHR5 308 aaKnown RBP15.86■□□□□ 0.13
CAPN1-214ENST00000528165 PHLPP1O60346 1717 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 TCP11X1B4DZS4 312 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 LUC7L3O95232 432 aaKnown RBP15.85■□□□□ 0.13
CAPN1-214ENST00000528165 ATP2A2P16615 1042 aaKnown RBP15.85■□□□□ 0.13
CAPN1-214ENST00000528165 STAT1P42224 750 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 MSH2P43246 934 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 CRKLP46109 303 aaKnown RBP15.85■□□□□ 0.13
CAPN1-214ENST00000528165 ICA1Q05084 483 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 LRRC14Q15048 493 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 MIS18BP1Q6P0N0 1132 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 GJB7Q6PEY0 223 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 MGARPQ8TDB4 240 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 HAS1Q92839 578 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 CELF1Q92879 486 aaKnown RBP15.85■□□□□ 0.13
CAPN1-214ENST00000528165 DBR1Q9UK59 544 aaKnown RBP15.85■□□□□ 0.13
CAPN1-214ENST00000528165 CORO1CQ9ULV4 474 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-214ENST00000528165 NCANO14594 1321 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 A8MUI8 341 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 TMEM253P0C7T8 217 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 CYP11B2P19099 503 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 LMNB1P20700 586 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 AUHQ13825 339 aaKnown RBP15.85■□□□□ 0.13
CAPN1-214ENST00000528165 ERFEQ4G0M1 354 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 HYIQ5T013 277 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 BARGINQ6ZT62 677 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 GLYCTKQ8IVS8 523 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 LNX1Q8TBB1 728 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-214ENST00000528165 C18orf8Q96DM3 657 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 PLCD4Q9BRC7 762 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 MOV10L1Q9BXT6 1211 aaKnown RBP15.85■□□□□ 0.13
CAPN1-214ENST00000528165 SIX2Q9NPC8 291 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 GRHL1Q9NZI5 618 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 TRAF3IP3Q9Y228 551 aa15.85■□□□□ 0.13
CAPN1-214ENST00000528165 LIN7AO14910 233 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-214ENST00000528165 RIPK2O43353 540 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 SF3B3Q15393 1217 aaKnown RBP15.84■□□□□ 0.13
CAPN1-214ENST00000528165 ANKRD20A2Q5SQ80 823 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 ANKRD20A1Q5TYW2 823 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 ANKRD20A3Q5VUR7 823 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 ARHGEF3Q9NR81 526 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.84■□□□□ 0.13
CAPN1-214ENST00000528165 KIF13BQ9NQT8 1826 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 POTEB3A0JP26 581 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 POTECB2RU33 542 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 EVI5O60447 810 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 PHF2O75151 1096 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 RPL21P46778 160 aaKnown RBP15.84■□□□□ 0.13
CAPN1-214ENST00000528165 CASP5P51878 434 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 PPATQ06203 517 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 KNOP1Q1ED39 458 aaKnown RBP15.84■□□□□ 0.13
CAPN1-214ENST00000528165 UBAP2Q5T6F2 1119 aaKnown RBP15.84■□□□□ 0.13
CAPN1-214ENST00000528165 NUGGCQ68CJ6 796 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 POTEBQ6S5H4 581 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 RIOX1Q9H6W3 641 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 ARL2BPQ9Y2Y0 163 aa15.84■□□□□ 0.13
CAPN1-214ENST00000528165 LAMB2P55268 1798 aa15.83■□□□□ 0.13
CAPN1-214ENST00000528165 USP17L5A8MUK1 530 aa15.83■□□□□ 0.13
CAPN1-214ENST00000528165 O00370 1275 aa15.83■□□□□ 0.13
CAPN1-214ENST00000528165 PODXLO00592 558 aa15.83■□□□□ 0.13
CAPN1-214ENST00000528165 CALUO43852 315 aaPredicted RBP15.83■□□□□ 0.13
CAPN1-214ENST00000528165 BAG3O95817 575 aa15.83■□□□□ 0.13
CAPN1-214ENST00000528165 CHRNA3P32297 505 aa15.83■□□□□ 0.13
CAPN1-214ENST00000528165 TNFAIP8L3Q5GJ75 292 aa15.83■□□□□ 0.13
CAPN1-214ENST00000528165 MAPKAPK5Q8IW41 473 aa15.83■□□□□ 0.13
CAPN1-214ENST00000528165 SLC30A5Q8TAD4 765 aa15.83■□□□□ 0.13
CAPN1-214ENST00000528165 TBC1D16Q8TBP0 767 aa15.83■□□□□ 0.13
CAPN1-214ENST00000528165 METTL14Q9HCE5 456 aaKnown RBP15.83■□□□□ 0.13
CAPN1-214ENST00000528165 FRMPD2Q68DX3 1309 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-214ENST00000528165 AKAP3O75969 853 aa15.83■□□□□ 0.12
CAPN1-214ENST00000528165 LDHBP07195 334 aaKnown RBP15.83■□□□□ 0.12
CAPN1-214ENST00000528165 BLMHQ13867 455 aa15.83■□□□□ 0.12
CAPN1-214ENST00000528165 MFSD5Q6N075 450 aa15.83■□□□□ 0.12
CAPN1-214ENST00000528165 SPATA21Q7Z572 469 aa15.83■□□□□ 0.12
CAPN1-214ENST00000528165 EXOC3L1Q86VI1 746 aa15.83■□□□□ 0.12
CAPN1-214ENST00000528165 NEDD1Q8NHV4 660 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms