RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 TBX3O15119 743 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 MAFO75444 373 aaPredicted RBP11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 ITGB1P05556 798 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 FGFR1P11362 822 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 TMOD1P28289 359 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 QARSP47897 775 aaKnown RBP11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 COL19A1Q14993 1142 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 AAK1Q2M2I8 961 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 KSR1Q8IVT5 923 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 DIS3L2Q8IYB7 885 aaKnown RBP11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 KLHL23Q8NBE8 558 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 SPPL3Q8TCT6 385 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 C11orf84Q9BUA3 381 aaPredicted RBP11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 RGL1Q9NZL6 768 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 LRFN2Q9ULH4 789 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 LIMCH1Q9UPQ0 1083 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 RWDD3Q9Y3V2 267 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 PCDHB7Q9Y5E2 793 aa11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 FNDC1Q4ZHG4 1894 aaPredicted RBP11.72□□□□□ -0.53
PRPF40B-204ENST00000527253 A0A087WZ62 844 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 TBKBP1A7MCY6 615 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 EIF5BO60841 1220 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 CSPG5O95196 566 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 P4HBP07237 508 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 KCNA5P22460 613 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 GTF2F1P35269 517 aaKnown RBP eCLIP11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 IRS1P35568 1242 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 GUCY1B3Q02153 619 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 CTTNQ14247 550 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 EPHA7Q15375 998 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 LEXMQ3ZCV2 418 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 TIGD5Q53EQ6 642 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 ODR4Q5SWX8 454 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 NCAPH2Q6IBW4 605 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 LRRC55Q6ZSA7 311 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 FAM43BQ6ZT52 329 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 CCDC83Q8IWF9 413 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 NLRP7Q8WX94 980 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 P2RX5Q93086 422 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 DYDC2Q96IM9 177 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 NAP1L4Q99733 375 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 FDXACB1Q9BRP7 624 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 PLVAPQ9BX97 442 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 LMAN2LQ9H0V9 348 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 NSUN3Q9H649 340 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 CWH43Q9H720 699 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 CYP26B1Q9NR63 512 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 TYW1Q9NV66 732 aaKnown RBP11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 TMEM161AQ9NX61 479 aa11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 SUCLA2Q9P2R7 463 aaPredicted RBP11.71□□□□□ -0.53
PRPF40B-204ENST00000527253 XIRP2A4UGR9 3374 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 SLITRK3O94933 977 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 LTBRP36941 435 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 CYP4A11Q02928 519 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 HYAL1Q12794 435 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 ZNF598Q86UK7 904 aaKnown RBP11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 ECHDC2Q86YB7 292 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 C4orf19Q8IY42 314 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 ZNF710Q8N1W2 664 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 IL27Q8NEV9 243 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 NEK9Q8TD19 979 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 CASD1Q96PB1 797 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 MTMR9Q96QG7 549 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 HSD17B14Q9BPX1 270 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 LXNQ9BS40 222 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 TMEM60Q9H2L4 133 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 ELAC1Q9H777 363 aaKnown RBP11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 ATP6V0A4Q9HBG4 840 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 CD320Q9NPF0 282 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 PCDHGC5Q9Y5F6 944 aa11.7□□□□□ -0.54
PRPF40B-204ENST00000527253 A0A087WWV3 80 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 H3BQ06 376 aaPredicted RBP11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 MARCH6O60337 910 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 IL9P15248 144 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 ATF7P17544 494 aaPredicted RBP11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 DLX2Q07687 328 aaPredicted RBP11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 CALCRLQ16602 461 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 CTC1Q2NKJ3 1217 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 NAALADL2Q58DX5 795 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 CLLU1OSQ5K130 101 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 ADGRD2Q7Z7M1 963 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 RHPN2Q8IUC4 686 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 SLFN12Q8IYM2 578 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 POF1BQ8WVV4 589 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 KHSRPQ92945 711 aaKnown RBP eCLIP11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 TMEM143Q96AN5 459 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 PABPC5Q96DU9 382 aaKnown RBP11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 CEP170P1Q96L14 293 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 SCLT1Q96NL6 688 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 EIF2AK1Q9BQI3 630 aaKnown RBP11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 GCOM2Q9BZD3 368 aaPredicted RBP11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 DHX33Q9H6R0 707 aaKnown RBP11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 IFT122Q9HBG6 1241 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 BRMS1Q9HCU9 246 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 BMP2KQ9NSY1 1161 aaPredicted RBP11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 MUC3AQ02505 3323 aa11.69□□□□□ -0.54
PRPF40B-204ENST00000527253 A0A0U1RQF3 1178 aa11.68□□□□□ -0.54
PRPF40B-204ENST00000527253 LINC01565O15544 149 aa11.68□□□□□ -0.54
PRPF40B-204ENST00000527253 BAG4O95429 457 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms