RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 CRYBB1P53674 252 aaPredicted RBP14.38□□□□□ -0.11
SMPD1-202ENST00000526280 KIZQ2M2Z5 673 aa14.38□□□□□ -0.11
SMPD1-202ENST00000526280 FBXO47Q5MNV8 452 aa14.38□□□□□ -0.11
SMPD1-202ENST00000526280 TMEM240Q5SV17 173 aa14.38□□□□□ -0.11
SMPD1-202ENST00000526280 SHC4Q6S5L8 630 aa14.38□□□□□ -0.11
SMPD1-202ENST00000526280 ZNF365Q70YC5 407 aa14.38□□□□□ -0.11
SMPD1-202ENST00000526280 MCPH1Q8NEM0 835 aa14.38□□□□□ -0.11
SMPD1-202ENST00000526280 RASSF8Q8NHQ8 419 aa14.38□□□□□ -0.11
SMPD1-202ENST00000526280 LRRC15Q8TF66 581 aa14.38□□□□□ -0.11
SMPD1-202ENST00000526280 TCP11Q8WWU5 503 aa14.38□□□□□ -0.11
SMPD1-202ENST00000526280 PRPF31Q8WWY3 499 aaKnown RBP14.38□□□□□ -0.11
SMPD1-202ENST00000526280 PSPC1Q8WXF1 523 aaKnown RBP14.38□□□□□ -0.11
SMPD1-202ENST00000526280 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.38□□□□□ -0.11
SMPD1-202ENST00000526280 BLOC1S4Q9NUP1 217 aa14.38□□□□□ -0.11
SMPD1-202ENST00000526280 CCDC39Q9UFE4 941 aa14.38□□□□□ -0.11
SMPD1-202ENST00000526280 LOXHD1Q8IVV2 1947 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 ASAP2O43150 1006 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 FGBP02675 491 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 PLA2G4BP0C869 781 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 GHRP10912 638 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 ARL2P36404 184 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 GPC3P51654 580 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 SLC12A3P55017 1021 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 LPIN1Q14693 890 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 PLEKHG4Q58EX7 1191 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 PSRC1Q6PGN9 363 aaPredicted RBP14.37□□□□□ -0.11
SMPD1-202ENST00000526280 TSHZ1Q6ZSZ6 1077 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 C1orf186Q6ZWK4 172 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 RHPN2Q8IUC4 686 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 SYT2Q8N9I0 419 aaPredicted RBP14.37□□□□□ -0.11
SMPD1-202ENST00000526280 USP38Q8NB14 1042 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 PPP1R16BQ96T49 567 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 GINS2Q9Y248 185 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 COL4A3BPQ9Y5P4 624 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 SIP14410 1827 aa14.37□□□□□ -0.11
SMPD1-202ENST00000526280 A0A087X0B3 334 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 RBAK-RBAKDNI3L0D1 243 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 LAMTOR4Q0VGL1 99 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 MXD4Q14582 209 aaPredicted RBP14.36□□□□□ -0.11
SMPD1-202ENST00000526280 SHHQ15465 462 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 TCTN1Q2MV58 587 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 C9orf50Q5SZB4 431 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 RRAGBQ5VZM2 374 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 RESP18Q5W5W9 173 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 ADALQ6DHV7 355 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 RINT1Q6NUQ1 792 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 CNKSR3Q6P9H4 555 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 ZNF410Q86VK4 478 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 KSR1Q8IVT5 923 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 DBF4BQ8NFT6 615 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 TMEM40Q8WWA1 233 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 NLRP7Q8WX94 980 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 HERVK_113Q902F9 699 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 SEPT8Q92599 483 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 RAD54LQ92698 747 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 ZNF668Q96K58 619 aaPredicted RBP14.36□□□□□ -0.11
SMPD1-202ENST00000526280 OSMRQ99650 979 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 RUSC1Q9BVN2 902 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 PANK2Q9BZ23 570 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 POLR3FQ9H1D9 316 aaPredicted RBP14.36□□□□□ -0.11
SMPD1-202ENST00000526280 AGO3Q9H9G7 860 aaKnown RBP14.36□□□□□ -0.11
SMPD1-202ENST00000526280 GPRC5CQ9NQ84 441 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 STK17AQ9UEE5 414 aa14.36□□□□□ -0.11
SMPD1-202ENST00000526280 TRIOBPQ9H2D6 2365 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 A0A087WZ62 844 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 SSBP05455 408 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMPD1-202ENST00000526280 ACTN1P12814 892 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 DARSP14868 501 aaKnown RBP14.35□□□□□ -0.11
SMPD1-202ENST00000526280 GLRA2P23416 452 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 EIF4BP23588 611 aaKnown RBP14.35□□□□□ -0.11
SMPD1-202ENST00000526280 MCM6Q14566 821 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 NAALADL2Q58DX5 795 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 FAM102BQ5T8I3 360 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 RASIP1Q5U651 963 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 CCDC73Q6ZRK6 1079 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 MAEAQ7L5Y9 396 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 OTOP2Q7RTS6 562 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 TDHQ8IZJ6 230 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 ASAP3Q8TDY4 903 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 LARP4BQ92615 738 aaKnown RBP14.35□□□□□ -0.11
SMPD1-202ENST00000526280 NLRP4Q96MN2 994 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 FDXACB1Q9BRP7 624 aaPredicted RBP14.35□□□□□ -0.11
SMPD1-202ENST00000526280 IFIH1Q9BYX4 1025 aaKnown RBP14.35□□□□□ -0.11
SMPD1-202ENST00000526280 GCOM2Q9BZD3 368 aaPredicted RBP14.35□□□□□ -0.11
SMPD1-202ENST00000526280 GDPD2Q9HCC8 539 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 KCND2Q9NZV8 630 aa14.35□□□□□ -0.11
SMPD1-202ENST00000526280 NOC2LQ9Y3T9 749 aaKnown RBP14.35□□□□□ -0.11
SMPD1-202ENST00000526280 A0A1W2PPC1 479 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 RPS6KA5O75582 802 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 BAIAP3O94812 1187 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 SRGAP2CP0DJJ0 459 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 CMA1P23946 247 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 GUCY2CP25092 1073 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 CD52P31358 61 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 POU5F1BQ06416 359 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 IKBKEQ14164 716 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 ARSHQ5FYA8 562 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 PDILTQ8N807 584 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 RNF149Q8NC42 400 aa14.34□□□□□ -0.11
SMPD1-202ENST00000526280 KIFAP3Q92845 792 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms