RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 H2AFYO75367 372 aaKnown RBP6.37□□□□□ -1.39
CSDE1-210ENST00000525878 PRLP01236 227 aa6.37□□□□□ -1.39
CSDE1-210ENST00000525878 APPP05067 770 aa6.37□□□□□ -1.39
CSDE1-210ENST00000525878 ADH4P08319 380 aa6.37□□□□□ -1.39
CSDE1-210ENST00000525878 GTF2F1P35269 517 aaKnown RBP eCLIP6.37□□□□□ -1.391e-7■■■■■ 29.4
CSDE1-210ENST00000525878 STAT3P40763 770 aa6.37□□□□□ -1.39
CSDE1-210ENST00000525878 ANTXR2P58335 489 aa6.37□□□□□ -1.39
CSDE1-210ENST00000525878 Q6ZPA2 131 aa6.37□□□□□ -1.39
CSDE1-210ENST00000525878 ZNF627Q7L945 461 aa6.37□□□□□ -1.39
CSDE1-210ENST00000525878 ANKRD35Q8N283 1001 aa6.37□□□□□ -1.39
CSDE1-210ENST00000525878 THAP3Q8WTV1 239 aaPredicted RBP6.37□□□□□ -1.39
CSDE1-210ENST00000525878 GFM2Q969S9 779 aaKnown RBP6.37□□□□□ -1.39
CSDE1-210ENST00000525878 GPHA2Q96T91 129 aa6.37□□□□□ -1.39
CSDE1-210ENST00000525878 A0A1W2PRX2 142 aa6.36□□□□□ -1.39
CSDE1-210ENST00000525878 ACAP1Q15027 740 aa6.36□□□□□ -1.39
CSDE1-210ENST00000525878 ARHGAP44Q17R89 818 aa6.36□□□□□ -1.39
CSDE1-210ENST00000525878 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
CSDE1-210ENST00000525878 ERCC4Q92889 916 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-210ENST00000525878 MIEF2Q96C03 454 aa6.36□□□□□ -1.39
CSDE1-210ENST00000525878 SAE1Q9UBE0 346 aaPredicted RBP6.36□□□□□ -1.39
CSDE1-210ENST00000525878 DENND2AQ9ULE3 1009 aa6.36□□□□□ -1.39
CSDE1-210ENST00000525878 RGS3P49796 1198 aa6.35□□□□□ -1.39
CSDE1-210ENST00000525878 SCNN1GP51170 649 aa6.35□□□□□ -1.39
CSDE1-210ENST00000525878 SLC25A3Q00325 362 aa6.35□□□□□ -1.39
CSDE1-210ENST00000525878 ULK2Q8IYT8 1036 aa6.35□□□□□ -1.39
CSDE1-210ENST00000525878 OR5AN1Q8NGI8 311 aa6.35□□□□□ -1.39
CSDE1-210ENST00000525878 E2F7Q96AV8 911 aa6.35□□□□□ -1.39
CSDE1-210ENST00000525878 HAPLN2Q9GZV7 340 aa6.35□□□□□ -1.39
CSDE1-210ENST00000525878 NCOA5Q9HCD5 579 aaKnown RBP6.35□□□□□ -1.39
CSDE1-210ENST00000525878 KRT4P19013 534 aa6.34□□□□□ -1.39
CSDE1-210ENST00000525878 SLC6A3Q01959 620 aa6.34□□□□□ -1.39
CSDE1-210ENST00000525878 ROM1Q03395 351 aa6.34□□□□□ -1.39
CSDE1-210ENST00000525878 GAGE13Q4V321 117 aa6.34□□□□□ -1.39
CSDE1-210ENST00000525878 C2orf27AQ580R0 203 aa6.34□□□□□ -1.39
CSDE1-210ENST00000525878 Q6ZRM9 215 aa6.34□□□□□ -1.39
CSDE1-210ENST00000525878 CLIP3Q96DZ5 547 aa6.34□□□□□ -1.39
CSDE1-210ENST00000525878 MAML3Q96JK9 1138 aa6.34□□□□□ -1.39
CSDE1-210ENST00000525878 PRRX2Q99811 253 aa6.34□□□□□ -1.39
CSDE1-210ENST00000525878 SLC2A4RGQ9NR83 387 aa6.34□□□□□ -1.39
CSDE1-210ENST00000525878 MAGEL2Q9UJ55 1249 aa6.34□□□□□ -1.39
CSDE1-210ENST00000525878 PTCH2Q9Y6C5 1203 aa6.34□□□□□ -1.39
CSDE1-210ENST00000525878 KIF11P52732 1056 aa6.33□□□□□ -1.4
CSDE1-210ENST00000525878 CRHR2Q13324 411 aa6.33□□□□□ -1.4
CSDE1-210ENST00000525878 DGKDQ16760 1214 aa6.33□□□□□ -1.4
CSDE1-210ENST00000525878 ZCCHC8Q6NZY4 707 aaKnown RBP6.33□□□□□ -1.4
CSDE1-210ENST00000525878 FAM111BQ6SJ93 734 aa6.33□□□□□ -1.4
CSDE1-210ENST00000525878 GAREM2Q75VX8 874 aa6.33□□□□□ -1.4
CSDE1-210ENST00000525878 MRGPRGQ86SM5 289 aa6.33□□□□□ -1.4
CSDE1-210ENST00000525878 CLEC14AQ86T13 490 aa6.33□□□□□ -1.4
CSDE1-210ENST00000525878 ZNF575Q86XF7 245 aa6.33□□□□□ -1.4
CSDE1-210ENST00000525878 ANKRD53Q8N9V6 530 aa6.33□□□□□ -1.4
CSDE1-210ENST00000525878 C16orf92Q96LL3 132 aa6.33□□□□□ -1.4
CSDE1-210ENST00000525878 SRPK1Q96SB4 655 aaKnown RBP6.33□□□□□ -1.4
CSDE1-210ENST00000525878 GPRC5BQ9NZH0 403 aa6.33□□□□□ -1.4
CSDE1-210ENST00000525878 RBM8AQ9Y5S9 174 aaKnown RBP6.33□□□□□ -1.4
CSDE1-210ENST00000525878 PLD2O14939 933 aa6.32□□□□□ -1.4
CSDE1-210ENST00000525878 BPIFB4P59827 614 aa6.32□□□□□ -1.4
CSDE1-210ENST00000525878 TCIRG1Q13488 830 aa6.32□□□□□ -1.4
CSDE1-210ENST00000525878 TOB2Q14106 344 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-210ENST00000525878 HTR3DQ70Z44 454 aa6.32□□□□□ -1.4
CSDE1-210ENST00000525878 BMP8AQ7Z5Y6 402 aa6.32□□□□□ -1.4
CSDE1-210ENST00000525878 GCDHQ92947 438 aaPredicted RBP6.32□□□□□ -1.4
CSDE1-210ENST00000525878 RPL10LQ96L21 214 aaKnown RBP6.32□□□□□ -1.4
CSDE1-210ENST00000525878 AGAP2Q99490 1192 aa6.32□□□□□ -1.4
CSDE1-210ENST00000525878 ACSS2Q9NR19 701 aa6.32□□□□□ -1.4
CSDE1-210ENST00000525878 KCMF1Q9P0J7 381 aa6.32□□□□□ -1.4
CSDE1-210ENST00000525878 UBE2QL1A1L167 161 aa6.31□□□□□ -1.4
CSDE1-210ENST00000525878 M0R2C6 588 aa6.31□□□□□ -1.4
CSDE1-210ENST00000525878 TRAF5O00463 557 aa6.31□□□□□ -1.4
CSDE1-210ENST00000525878 GLRX3O76003 335 aaKnown RBP6.31□□□□□ -1.4
CSDE1-210ENST00000525878 MAN2A2P49641 1150 aa6.31□□□□□ -1.4
CSDE1-210ENST00000525878 RABGGTBP53611 331 aa6.31□□□□□ -1.4
CSDE1-210ENST00000525878 KRTAP1-1Q07627 177 aa6.31□□□□□ -1.4
CSDE1-210ENST00000525878 SLFN12LQ6IEE8 588 aa6.31□□□□□ -1.4
CSDE1-210ENST00000525878 DDX53Q86TM3 631 aaKnown RBP6.31□□□□□ -1.4
CSDE1-210ENST00000525878 LILRB2Q8N423 598 aa6.31□□□□□ -1.4
CSDE1-210ENST00000525878 CHST14Q8NCH0 376 aa6.31□□□□□ -1.4
CSDE1-210ENST00000525878 CLUHP3Q96NS8 147 aa6.31□□□□□ -1.4
CSDE1-210ENST00000525878 IL23AQ9NPF7 189 aa6.31□□□□□ -1.4
CSDE1-210ENST00000525878 DMRT1Q9Y5R6 373 aa6.31□□□□□ -1.4
CSDE1-210ENST00000525878 XDHP47989 1333 aa6.3□□□□□ -1.4
CSDE1-210ENST00000525878 UBA6A0AVT1 1052 aaPredicted RBP6.3□□□□□ -1.4
CSDE1-210ENST00000525878 B4E1Z4 1266 aa6.3□□□□□ -1.4
CSDE1-210ENST00000525878 KRT37O76014 449 aa6.3□□□□□ -1.4
CSDE1-210ENST00000525878 CYP17A1P05093 508 aa6.3□□□□□ -1.4
CSDE1-210ENST00000525878 VSIG10L2P0DP72 767 aa6.3□□□□□ -1.4
CSDE1-210ENST00000525878 NANOS3P60323 173 aaKnown RBP6.3□□□□□ -1.4
CSDE1-210ENST00000525878 EPHA7Q15375 998 aa6.3□□□□□ -1.4
CSDE1-210ENST00000525878 TTC38Q5R3I4 469 aa6.3□□□□□ -1.4
CSDE1-210ENST00000525878 SOGA3Q5TF21 947 aa6.3□□□□□ -1.4
CSDE1-210ENST00000525878 PLA2G15Q8NCC3 412 aa6.3□□□□□ -1.4
CSDE1-210ENST00000525878 SAMD15Q9P1V8 674 aa6.3□□□□□ -1.4
CSDE1-210ENST00000525878 REXO2Q9Y3B8 237 aaKnown RBP6.3□□□□□ -1.4
CSDE1-210ENST00000525878 KLRG2A4D1S0 409 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-210ENST00000525878 FOXN1O15353 648 aa6.29□□□□□ -1.4
CSDE1-210ENST00000525878 IGFALSP35858 605 aa6.29□□□□□ -1.4
CSDE1-210ENST00000525878 COL10A1Q03692 680 aa6.29□□□□□ -1.4
CSDE1-210ENST00000525878 CNGB1Q14028 1251 aaPredicted RBP6.29□□□□□ -1.4
CSDE1-210ENST00000525878 ELAVL1Q15717 326 aaKnown RBP6.29□□□□□ -1.4
CSDE1-210ENST00000525878 FNDC3BQ53EP0 1204 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms