RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 FAM167BQ9BTA0 163 aa6.33□□□□□ -1.4
USP47-204ENST00000525078 TMPRSS13Q9BYE2 586 aa6.33□□□□□ -1.4
USP47-204ENST00000525078 C22orf23Q9BZE7 217 aa6.33□□□□□ -1.4
USP47-204ENST00000525078 MAGEH1Q9H213 219 aa6.33□□□□□ -1.4
USP47-204ENST00000525078 PRKRIP1Q9H875 184 aaPredicted RBP6.33□□□□□ -1.4
USP47-204ENST00000525078 UBN1Q9NPG3 1134 aa6.33□□□□□ -1.4
USP47-204ENST00000525078 BTG4Q9NY30 223 aa6.33□□□□□ -1.4
USP47-204ENST00000525078 ARHGAP28Q9P2N2 729 aa6.33□□□□□ -1.4
USP47-204ENST00000525078 FBXO10Q9UK96 956 aa6.33□□□□□ -1.4
USP47-204ENST00000525078 ADAMTS8Q9UP79 889 aa6.33□□□□□ -1.4
USP47-204ENST00000525078 LIMCH1Q9UPQ0 1083 aa6.33□□□□□ -1.4
USP47-204ENST00000525078 TIMM13Q9Y5L4 95 aaPredicted RBP6.33□□□□□ -1.4
USP47-204ENST00000525078 FAM170AA1A519 330 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 TM4SF5O14894 197 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 AREL1O15033 823 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 ALBP02768 609 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 FTLP02792 175 aaPredicted RBP6.32□□□□□ -1.4
USP47-204ENST00000525078 THP07101 528 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 PARP1P09874 1014 aaKnown RBP6.32□□□□□ -1.4
USP47-204ENST00000525078 HARSP12081 509 aaKnown RBP6.32□□□□□ -1.4
USP47-204ENST00000525078 COL6A2P12110 1019 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 DRD2P14416 443 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 TSHRP16473 764 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 BCL6P41182 706 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 HSPA7P48741 367 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 ALDH9A1P49189 494 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 MANFP55145 182 aaKnown RBP6.32□□□□□ -1.4
USP47-204ENST00000525078 NAP1L1P55209 391 aaKnown RBP6.32□□□□□ -1.4
USP47-204ENST00000525078 RPL11P62913 178 aaKnown RBP6.32□□□□□ -1.4
USP47-204ENST00000525078 TAF11Q15544 211 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 CCNG2Q16589 344 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 PFKFB4Q16877 469 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 MUM1Q2TAK8 710 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 ARL13BQ3SXY8 428 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 ZACNQ401N2 412 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 SLC45A4Q5BKX6 768 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 CPNE8Q86YQ8 564 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 PCYOX1LQ8NBM8 494 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 ZNF566Q969W8 418 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 NT5C1BQ96P26 610 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 MDFIQ99750 246 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 SORBS1Q9BX66 1292 aaKnown RBP6.32□□□□□ -1.4
USP47-204ENST00000525078 SH3GLB2Q9NR46 395 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 SMYD2Q9NRG4 433 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 DACT1Q9NYF0 836 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 DPP7Q9UHL4 492 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 STARD13Q9Y3M8 1113 aa6.32□□□□□ -1.4
USP47-204ENST00000525078 A6NLC8 198 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 HTRA2O43464 458 aaPredicted RBP6.31□□□□□ -1.4
USP47-204ENST00000525078 IL18RAPO95256 599 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 HSP90AB1P08238 724 aaKnown RBP6.31□□□□□ -1.4
USP47-204ENST00000525078 NCAM1P13591 858 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 RPS6KB1P23443 525 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 USP11P51784 963 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 ITGA8P53708 1063 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 CLNS1AP54105 237 aaKnown RBP6.31□□□□□ -1.4
USP47-204ENST00000525078 CCT2P78371 535 aaKnown RBP6.31□□□□□ -1.4
USP47-204ENST00000525078 ZBED6P86452 979 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 CDK17Q00537 523 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 LAPTM5Q13571 262 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 MPEG1Q2M385 716 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 GPATCH4Q5T3I0 446 aaKnown RBP6.31□□□□□ -1.4
USP47-204ENST00000525078 CIAPIN1Q6FI81 312 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 TMCO3Q6UWJ1 677 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 SPOCD1Q6ZMY3 1216 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 HEATR4Q86WZ0 1026 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 NOSTRINQ8IVI9 506 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 DMRTC2Q8IXT2 367 aaPredicted RBP6.31□□□□□ -1.4
USP47-204ENST00000525078 TXLNBQ8N3L3 684 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 GALNT15Q8N3T1 639 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 C7orf31Q8N865 590 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 DCAF11Q8TEB1 546 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 UCMAQ8WVF2 138 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 MUL1Q969V5 352 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 RGMAQ96B86 450 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 TRIM11Q96F44 468 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 SLC12A9Q9BXP2 914 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 ACE2Q9BYF1 805 aaPredicted RBP6.31□□□□□ -1.4
USP47-204ENST00000525078 UNKQ9C0B0 810 aaKnown RBP6.31□□□□□ -1.4
USP47-204ENST00000525078 C14orf93Q9H972 538 aaKnown RBP6.31□□□□□ -1.4
USP47-204ENST00000525078 WASH6PQ9NQA3 447 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 FAM105AQ9NUU6 356 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 GGA3Q9NZ52 723 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 STAP2Q9UGK3 403 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 FBXL7Q9UJT9 491 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 SIK3Q9Y2K2 1263 aa6.31□□□□□ -1.4
USP47-204ENST00000525078 B4E171 279 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 FRS3O43559 492 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 APOL3O95236 402 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 DDX58O95786 925 aaKnown RBP6.3□□□□□ -1.4
USP47-204ENST00000525078 TBX18O95935 607 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 VAV1P15498 845 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 POLD1P28340 1107 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 BMP8BP34820 402 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 TSPAN7P41732 249 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 LGALS4P56470 323 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 RAB1AP62820 205 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 DAG1Q14118 895 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 FGL2Q14314 439 aa6.3□□□□□ -1.4
USP47-204ENST00000525078 CDC37Q16543 378 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms