RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 LCHNA4D1U4 455 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 LINC01553A4QN01 128 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 ASAP2O43150 1006 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 STAG3L1P0CL83 205 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 SPATA31C1P0DKV0 1188 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 POLGP54098 1239 aaPredicted RBP23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 NPEPPSP55786 919 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 PTGDRQ13258 359 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 PLA2G4FQ68DD2 849 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 MCTP1Q6DN14 999 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 NPAS4Q8IUM7 802 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 TGS1Q96RS0 853 aaKnown RBP23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 YME1L1Q96TA2 773 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 PRDM12Q9H4Q4 367 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 SUCLA2Q9P2R7 463 aaPredicted RBP23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 PCDHB6Q9Y5E3 794 aa23.33■■□□□ 1.33
TRAPPC9-215ENST00000524162 K7ELQ4 463 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 DGAT1O75907 488 aa23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 TECP42680 631 aa23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 SARSP49591 514 aaKnown RBP23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 NFX1Q12986 1120 aaKnown RBP23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 DRP2Q13474 957 aa23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 DSC3Q14574 896 aa23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 XKR9Q5GH70 373 aa23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 HAUS3Q68CZ6 603 aa23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 SLC24A5Q71RS6 500 aa23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 BRAPQ7Z569 592 aa23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 CATSPER3Q86XQ3 398 aa23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 IGSF22Q8N9C0 903 aa23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 ZNF689Q96CS4 500 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 GCOM2Q9BZD3 368 aaPredicted RBP23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 ELAC1Q9H777 363 aaKnown RBP23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 DBR1Q9UK59 544 aaKnown RBP23.32■■□□□ 1.32
TRAPPC9-215ENST00000524162 FNDC1Q4ZHG4 1894 aaPredicted RBP23.31■■□□□ 1.32
TRAPPC9-215ENST00000524162 DGKIO75912 1065 aa23.31■■□□□ 1.32
TRAPPC9-215ENST00000524162 ARHGEF15O94989 841 aa23.31■■□□□ 1.32
TRAPPC9-215ENST00000524162 RARRES1P49788 294 aa23.31■■□□□ 1.32
TRAPPC9-215ENST00000524162 FAM189BP81408 668 aa23.31■■□□□ 1.32
TRAPPC9-215ENST00000524162 POU5F1BQ06416 359 aa23.31■■□□□ 1.32
TRAPPC9-215ENST00000524162 KCTD17Q8N5Z5 321 aa23.31■■□□□ 1.32
TRAPPC9-215ENST00000524162 PSPC1Q8WXF1 523 aaKnown RBP23.31■■□□□ 1.32
TRAPPC9-215ENST00000524162 NACC1Q96RE7 527 aa23.31■■□□□ 1.32
TRAPPC9-215ENST00000524162 TRAIPQ9BWF2 469 aa23.31■■□□□ 1.32
TRAPPC9-215ENST00000524162 CHST12Q9NRB3 414 aa23.31■■□□□ 1.32
TRAPPC9-215ENST00000524162 LMCD1Q9NZU5 365 aa23.31■■□□□ 1.32
TRAPPC9-215ENST00000524162 UNC80Q8N2C7 3258 aa23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 C9IYK1 514 aa23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 MXD4Q14582 209 aaPredicted RBP23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 EMC2Q15006 297 aa23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 PCBP1Q15365 356 aaKnown RBP eCLIP23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 ARL6IP4Q66PJ3 421 aaKnown RBP23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 FAM117BQ6P1L5 589 aa23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 ZNF579Q8NAF0 562 aaKnown RBP23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 MAFAQ8NHW3 353 aaPredicted RBP23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 NLRP7Q8WX94 980 aa23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 SH2D3AQ9BRG2 576 aa23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 RWDD3Q9Y3V2 267 aa23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 COL4A3BPQ9Y5P4 624 aa23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 ADGRA3Q8IWK6 1321 aa23.3■■□□□ 1.32
TRAPPC9-215ENST00000524162 DENND3A2RUS2 1198 aa23.29■■□□□ 1.32
TRAPPC9-215ENST00000524162 UPP2O95045 317 aa23.29■■□□□ 1.32
TRAPPC9-215ENST00000524162 ATP2C1P98194 919 aaPredicted RBP23.29■■□□□ 1.32
TRAPPC9-215ENST00000524162 ADGRE1Q14246 886 aa23.29■■□□□ 1.32
TRAPPC9-215ENST00000524162 RSPH1Q8WYR4 309 aa23.29■■□□□ 1.32
TRAPPC9-215ENST00000524162 CLP1Q92989 425 aaKnown RBP23.29■■□□□ 1.32
TRAPPC9-215ENST00000524162 MTRQ99707 1265 aa23.29■■□□□ 1.32
TRAPPC9-215ENST00000524162 ADAM2Q99965 735 aa23.29■■□□□ 1.32
TRAPPC9-215ENST00000524162 ZBTB39O15060 712 aa23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 MGEA5O60502 916 aa23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 BMP15O95972 392 aa23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 PDIA4P13667 645 aaKnown RBP23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 ZSCAN20P17040 1043 aaPredicted RBP23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 SFPQP23246 707 aaKnown RBP eCLIP23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 NBR1Q14596 966 aa23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 SRGAP1Q7Z6B7 1085 aa23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 FERMT3Q86UX7 667 aa23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 RHPN2Q8IUC4 686 aa23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 CMTR2Q8IYT2 770 aaKnown RBP23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 PRPF31Q8WWY3 499 aaKnown RBP23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 SCLT1Q96NL6 688 aa23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 IFT122Q9HBG6 1241 aa23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 DACT1Q9NYF0 836 aa23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 LRWD1Q9UFC0 647 aa23.28■■□□□ 1.32
TRAPPC9-215ENST00000524162 A0A087WZ62 844 aa23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 MED24O75448 989 aa23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 DTHD1Q6ZMT9 781 aa23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 IFNLR1Q8IU57 520 aaPredicted RBP23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 ARNTL2Q8WYA1 636 aa23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 CCDC43Q96MW1 224 aaKnown RBP23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 FDXACB1Q9BRP7 624 aaPredicted RBP23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 NFKBIZQ9BYH8 718 aa23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 ATP6V0A4Q9HBG4 840 aa23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 XPNPEP1Q9NQW7 623 aa23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 TMEM161AQ9NX61 479 aa23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 COL4A4P53420 1690 aaPredicted RBP23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 REV3LO60673 3130 aa23.27■■□□□ 1.32
TRAPPC9-215ENST00000524162 C5orf67F2Z3F1 127 aa23.26■■□□□ 1.31
TRAPPC9-215ENST00000524162 RB1P06400 928 aa23.26■■□□□ 1.31
TRAPPC9-215ENST00000524162 LAMTOR4Q0VGL1 99 aa23.26■■□□□ 1.31
TRAPPC9-215ENST00000524162 FIBCD1Q8N539 461 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms