RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 CELF2-AS1Q8N7Q2 184 aa4.45□□□□□ -1.7
PCM1-217ENST00000522998 MB21D1Q8N884 522 aa4.45□□□□□ -1.7
PCM1-217ENST00000522998 GFM2Q969S9 779 aaKnown RBP4.45□□□□□ -1.7
PCM1-217ENST00000522998 ZNF408Q9H9D4 720 aa4.45□□□□□ -1.7
PCM1-217ENST00000522998 SMURF1Q9HCE7 757 aa4.45□□□□□ -1.7
PCM1-217ENST00000522998 PCDHA8Q9Y5H6 950 aa4.45□□□□□ -1.7
PCM1-217ENST00000522998 FOXP2O15409 715 aa4.44□□□□□ -1.7
PCM1-217ENST00000522998 ITGB6P18564 788 aa4.44□□□□□ -1.7
PCM1-217ENST00000522998 GUCY1A3Q02108 690 aa4.44□□□□□ -1.7
PCM1-217ENST00000522998 TCIRG1Q13488 830 aa4.44□□□□□ -1.7
PCM1-217ENST00000522998 DDR2Q16832 855 aa4.44□□□□□ -1.7
PCM1-217ENST00000522998 FAM47CQ5HY64 1035 aa4.44□□□□□ -1.7
PCM1-217ENST00000522998 MFSD5Q6N075 450 aa4.44□□□□□ -1.7
PCM1-217ENST00000522998 LRRC47Q8N1G4 583 aaKnown RBP4.44□□□□□ -1.7
PCM1-217ENST00000522998 BEND2Q8NDZ0 799 aa4.44□□□□□ -1.7
PCM1-217ENST00000522998 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.44□□□□□ -1.7
PCM1-217ENST00000522998 SYNPO2LQ9H987 977 aa4.44□□□□□ -1.7
PCM1-217ENST00000522998 IL23AQ9NPF7 189 aa4.44□□□□□ -1.7
PCM1-217ENST00000522998 SAE1Q9UBE0 346 aaPredicted RBP4.44□□□□□ -1.7
PCM1-217ENST00000522998 ASB1Q9Y576 335 aa4.44□□□□□ -1.7
PCM1-217ENST00000522998 HS3ST4Q9Y661 456 aa4.44□□□□□ -1.7
PCM1-217ENST00000522998 CCDC66A2RUB6 948 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 C2orf78A6NCI8 922 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 GRXCR1A8MXD5 290 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 ARVCFO00192 962 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 SCDO00767 359 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 MFAP3LO75121 409 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 IPO13O94829 963 aaKnown RBP4.43□□□□□ -1.7
PCM1-217ENST00000522998 DNM2P50570 870 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 ADAM8P78325 824 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 TIGD2Q4W5G0 525 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 EPHA10Q5JZY3 1008 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 TMCO4Q5TGY1 634 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 C1QL3Q5VWW1 255 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 PAPD7Q5XG87 772 aaKnown RBP4.43□□□□□ -1.7
PCM1-217ENST00000522998 HNRNPLLQ8WVV9 542 aaKnown RBP4.43□□□□□ -1.7
PCM1-217ENST00000522998 PTPRN2Q92932 1015 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 CYP4F11Q9HBI6 524 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 KCNH7Q9NS40 1196 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 RCAN3Q9UKA8 241 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 DENND2AQ9ULE3 1009 aa4.43□□□□□ -1.7
PCM1-217ENST00000522998 NAT1P18440 290 aa4.42□□□□□ -1.7
PCM1-217ENST00000522998 LACTBP83111 547 aaPredicted RBP4.42□□□□□ -1.7
PCM1-217ENST00000522998 GAGE13Q4V321 117 aa4.42□□□□□ -1.7
PCM1-217ENST00000522998 TM4SF20Q53R12 229 aa4.42□□□□□ -1.7
PCM1-217ENST00000522998 NBPF6Q5VWK0 638 aa4.42□□□□□ -1.7
PCM1-217ENST00000522998 RD3Q7Z3Z2 195 aa4.42□□□□□ -1.7
PCM1-217ENST00000522998 NOSTRINQ8IVI9 506 aa4.42□□□□□ -1.7
PCM1-217ENST00000522998 ST13P5Q8NFI4 369 aaPredicted RBP4.42□□□□□ -1.7
PCM1-217ENST00000522998 MDGA1Q8NFP4 955 aa4.42□□□□□ -1.7
PCM1-217ENST00000522998 CPT1CQ8TCG5 803 aa4.42□□□□□ -1.7
PCM1-217ENST00000522998 NBPF4Q96M43 638 aa4.42□□□□□ -1.7
PCM1-217ENST00000522998 MAGEL2Q9UJ55 1249 aa4.42□□□□□ -1.7
PCM1-217ENST00000522998 SORCS3Q9UPU3 1222 aa4.42□□□□□ -1.7
PCM1-217ENST00000522998 COX11Q9Y6N1 276 aa4.42□□□□□ -1.7
PCM1-217ENST00000522998 COL4A3Q01955 1670 aa4.41□□□□□ -1.7
PCM1-217ENST00000522998 RASSF10A6NK89 507 aa4.41□□□□□ -1.7
PCM1-217ENST00000522998 GOLGA6L22H0YM25 854 aa4.41□□□□□ -1.7
PCM1-217ENST00000522998 CLK3P49761 638 aaKnown RBP4.41□□□□□ -1.7
PCM1-217ENST00000522998 TAP1Q03518 808 aa4.41□□□□□ -1.7
PCM1-217ENST00000522998 PLEKHG4Q58EX7 1191 aa4.41□□□□□ -1.7
PCM1-217ENST00000522998 KRT40Q6A162 431 aa4.41□□□□□ -1.7
PCM1-217ENST00000522998 ZC3H7AQ8IWR0 971 aaKnown RBP4.41□□□□□ -1.7
PCM1-217ENST00000522998 CISD2Q8N5K1 135 aaKnown RBP4.41□□□□□ -1.7
PCM1-217ENST00000522998 ARL8AQ96BM9 186 aa4.41□□□□□ -1.7
PCM1-217ENST00000522998 ZNF512Q96ME7 567 aaPredicted RBP4.41□□□□□ -1.7
PCM1-217ENST00000522998 RECQL4O94761 1208 aa4.4□□□□□ -1.71
PCM1-217ENST00000522998 ALDH6A1Q02252 535 aaKnown RBP4.4□□□□□ -1.71
PCM1-217ENST00000522998 ZNF362Q5T0B9 420 aaPredicted RBP4.4□□□□□ -1.71
PCM1-217ENST00000522998 NAIF1Q69YI7 327 aaPredicted RBP4.4□□□□□ -1.71
PCM1-217ENST00000522998 ERCC4Q92889 916 aaPredicted RBP4.4□□□□□ -1.71
PCM1-217ENST00000522998 MRRFQ96E11 262 aaKnown RBP4.4□□□□□ -1.71
PCM1-217ENST00000522998 FAM193BQ96PV7 902 aaPredicted RBP4.4□□□□□ -1.71
PCM1-217ENST00000522998 R3HDMLQ9H3Y0 253 aa4.4□□□□□ -1.71
PCM1-217ENST00000522998 SPATA31A6Q5VVP1 1343 aa4.4□□□□□ -1.71
PCM1-217ENST00000522998 TOX4O94842 621 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 SCAF4O95104 1147 aaKnown RBP4.39□□□□□ -1.71
PCM1-217ENST00000522998 FGRP09769 529 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 VSIG10L2P0DP72 767 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 LAG3P18627 525 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 SDHAP31040 664 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 USP14P54578 494 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 GNL2Q13823 731 aaKnown RBP4.39□□□□□ -1.71
PCM1-217ENST00000522998 TMEM132BQ14DG7 1078 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 DCAF17Q5H9S7 520 aaPredicted RBP4.39□□□□□ -1.71
PCM1-217ENST00000522998 FSTL4Q6MZW2 842 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 Q6YL49 198 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 PLA2G15Q8NCC3 412 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 SUPT20HQ8NEM7 779 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 OR5AN1Q8NGI8 311 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 ST8SIA2Q92186 375 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 C16orf92Q96LL3 132 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 CDC6Q99741 560 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 PCDHA9Q9Y5H5 950 aa4.39□□□□□ -1.71
PCM1-217ENST00000522998 CENPVL1A0A0U1RR11 272 aa4.38□□□□□ -1.71
PCM1-217ENST00000522998 TRIM24O15164 1050 aa4.38□□□□□ -1.71
PCM1-217ENST00000522998 JUNP05412 331 aaKnown RBP4.38□□□□□ -1.71
PCM1-217ENST00000522998 GYPEP15421 78 aa4.38□□□□□ -1.71
PCM1-217ENST00000522998 GNAT2P19087 354 aa4.38□□□□□ -1.71
PCM1-217ENST00000522998 ZFP36P26651 326 aaKnown RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms