RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 HCSTQ9UBK5 93 aa11.52□□□□□ -0.57
CTNNA1-235ENST00000522730 LOXHD1Q8IVV2 1947 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 FAM86C2PA6NEL3 165 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 C9IYK1 514 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 M0R2N6 131 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 NCK2O43639 380 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 SLC37A4O43826 429 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 CCNT1O60563 726 aaKnown RBP11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 PFKFB2O60825 505 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 IRS1P35568 1242 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 NRIP1P48552 1158 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 AK2P54819 239 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 DLX2Q07687 328 aaPredicted RBP11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 DRP2Q13474 957 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 NPY5RQ15761 445 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 PUS10Q3MIT2 529 aaKnown RBP11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 LONRF3Q496Y0 759 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 ADGRD2Q7Z7M1 963 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 FAM178BQ8IXR5 827 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 THNSL1Q8IYQ7 743 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 ABI1Q8IZP0 508 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 DAGLBQ8NCG7 672 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 NEK9Q8TD19 979 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 PHF20Q9BVI0 1012 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 C1QTNF1Q9BXJ1 281 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 TLE6Q9H808 572 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 PCDHGC5Q9Y5F6 944 aa11.51□□□□□ -0.57
CTNNA1-235ENST00000522730 MYH9P35579 1960 aaKnown RBP11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 C5orf42Q9H799 3197 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 EML1O00423 815 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 PER2O15055 1255 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 MMP1P03956 469 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 LTBRP36941 435 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 NDUFV1P49821 464 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 GPC3P51654 580 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 NEK4P51957 841 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 FAM189BP81408 668 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 CAMK1Q14012 370 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 DSC3Q14574 896 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 ANKRD1Q15327 319 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 NAALADL2Q58DX5 795 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 PLA2G4FQ68DD2 849 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 NEK8Q86SG6 692 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 RHPN2Q8IUC4 686 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 KSR1Q8IVT5 923 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 RDM1Q8NG50 284 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 ETNPPLQ8TBG4 499 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 P2RX5Q93086 422 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 PPP2R3CQ969Q6 453 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 NIFKQ9BYG3 293 aaKnown RBP11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 GCOM2Q9BZD3 368 aaPredicted RBP11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 BMP2KQ9NSY1 1161 aaPredicted RBP11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 TMEM161AQ9NX61 479 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 SUCLA2Q9P2R7 463 aaPredicted RBP11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 FAM50BQ9Y247 325 aa11.5□□□□□ -0.57
CTNNA1-235ENST00000522730 A0A087WZ62 844 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 FAM205CA6NFA0 338 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 FGF18O76093 207 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 STBD1O95210 358 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 CTDNEP1O95476 244 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 DARSP14868 501 aaKnown RBP11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 PBX3P40426 434 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 QARSP47897 775 aaKnown RBP11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 NPEPPSP55786 919 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 PSMC5P62195 406 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 NR5A1Q13285 461 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 ADAM15Q13444 863 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 TARBP2Q15633 366 aaKnown RBP11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 NCAPH2Q6IBW4 605 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 ECHDC2Q86YB7 292 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 LINC01465Q8N7H1 131 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 COLGALT1Q8NBJ5 622 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 WASF1Q92558 559 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 MBOAT7Q96N66 472 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 FDXACB1Q9BRP7 624 aaPredicted RBP11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 NLRC5Q86WI3 1866 aa11.49□□□□□ -0.57
CTNNA1-235ENST00000522730 BAG4O95429 457 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 SRGAP2CP0DJJ0 459 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 ATP2B1P20020 1258 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 CA8P35219 290 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 KRT2P35908 639 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 ANAPC15P60006 121 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 ERVFC1P60507 584 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 ME3Q16798 604 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 CTC1Q2NKJ3 1217 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 EARS2Q5JPH6 523 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 TMEM31Q5JXX7 168 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 MOXD1Q6UVY6 613 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 LRRC55Q6ZSA7 311 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 ANO5Q75V66 913 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 PIP4P2Q8N4L2 257 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 ZNF579Q8NAF0 562 aaKnown RBP11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 HELQQ8TDG4 1101 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 TMEM143Q96AN5 459 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 CEP170P1Q96L14 293 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 FAM20AQ96MK3 541 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 NLRP4Q96MN2 994 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 CASD1Q96PB1 797 aa11.48□□□□□ -0.57
CTNNA1-235ENST00000522730 LRFN3Q9BTN0 628 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms