RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 TANC1Q9C0D5 1861 aa7.29□□□□□ -1.24
PABPC1-220ENST00000522658 FRMPD2Q68DX3 1309 aaPredicted RBP7.28□□□□□ -1.24
PABPC1-220ENST00000522658 TTC41PQ6P2S7 1318 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 FAM86C2PA6NEL3 165 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 NFIBO00712 420 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 GH1P01241 217 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 IQCF3P0C7M6 154 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 TOP1P11387 765 aaKnown RBP7.28□□□□□ -1.24
PABPC1-220ENST00000522658 CASTP20810 708 aaKnown RBP7.28□□□□□ -1.24
PABPC1-220ENST00000522658 PTGS1P23219 599 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 SLC16A2P36021 539 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 WDR5P61964 334 aaKnown RBP7.28□□□□□ -1.24
PABPC1-220ENST00000522658 TAP1Q03518 808 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 GRB10Q13322 594 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 USH1GQ495M9 461 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 TIGD5Q53EQ6 642 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 ADAMTSL4Q6UY14 1074 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 SLC30A10Q6XR72 485 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 CAPN12Q6ZSI9 719 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 LRRC8DQ7L1W4 858 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 CHST3Q7LGC8 479 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 RANBP17Q9H2T7 1088 aaKnown RBP7.28□□□□□ -1.24
PABPC1-220ENST00000522658 LMCD1Q9NZU5 365 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 DDX49Q9Y6V7 483 aaKnown RBP7.28□□□□□ -1.24
PABPC1-220ENST00000522658 MUC3AQ02505 3323 aa7.28□□□□□ -1.24
PABPC1-220ENST00000522658 GRIN2DO15399 1336 aa7.27□□□□□ -1.24
PABPC1-220ENST00000522658 TTC28Q96AY4 2481 aa7.27□□□□□ -1.24
PABPC1-220ENST00000522658 WISP1O95388 367 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 AMHP03971 560 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 ALADP13716 330 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 POU3F3P20264 500 aaPredicted RBP7.27□□□□□ -1.25
PABPC1-220ENST00000522658 KCNA5P22460 613 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 ATP11AP98196 1134 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 IKBKEQ14164 716 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 DGKDQ16760 1214 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 KRT40Q6A162 431 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 FAM117BQ6P1L5 589 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 SEPT14Q6ZU15 432 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 MCF2L2Q86YR7 1114 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 SIRT2Q8IXJ6 389 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 MYOCDQ8IZQ8 938 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 MORC4Q8TE76 937 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 STK32AQ8WU08 396 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 RAD9AQ99638 391 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 EPHX3Q9H6B9 360 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 UBE2ZQ9H832 354 aaPredicted RBP7.27□□□□□ -1.25
PABPC1-220ENST00000522658 RCAN3Q9UKA8 241 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 RAXQ9Y2V3 346 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 MRVI1Q9Y6F6 885 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 COL4A4P53420 1690 aaPredicted RBP7.27□□□□□ -1.25
PABPC1-220ENST00000522658 TCF20Q9UGU0 1960 aaKnown RBP7.27□□□□□ -1.25
PABPC1-220ENST00000522658 CCDC171Q6TFL3 1326 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 EMSYQ7Z589 1322 aa7.27□□□□□ -1.25
PABPC1-220ENST00000522658 ABHD14A-ACY1A0A1B0GW23 586 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 EPOPA6NHQ4 379 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 LINC01387J3KSC0 135 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 NMT2O60551 498 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 KIF4AO95239 1232 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 MMP3P08254 477 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 MFAP1P55081 439 aaKnown RBP7.26□□□□□ -1.25
PABPC1-220ENST00000522658 RPS6P62753 249 aaKnown RBP7.26□□□□□ -1.25
PABPC1-220ENST00000522658 STXBP2Q15833 593 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 GPATCH4Q5T3I0 446 aaKnown RBP7.26□□□□□ -1.25
PABPC1-220ENST00000522658 ARHGEF16Q5VV41 709 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 RASGRP2Q7LDG7 609 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 IQCA1Q86XH1 822 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 ARMC10Q8N2F6 343 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 NSUN6Q8TEA1 469 aaKnown RBP7.26□□□□□ -1.25
PABPC1-220ENST00000522658 PPP1R13LQ8WUF5 828 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 AFG1LQ8WV93 481 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 PIK3R5Q8WYR1 880 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 SAMD11Q96NU1 681 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 YME1L1Q96TA2 773 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 SEC62Q99442 399 aaKnown RBP7.26□□□□□ -1.25
PABPC1-220ENST00000522658 ALG1Q9BT22 464 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 RNF41Q9H4P4 317 aaPredicted RBP7.26□□□□□ -1.25
PABPC1-220ENST00000522658 MYO9BQ13459 2157 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 ABCB11O95342 1321 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 WDR19Q8NEZ3 1342 aa7.26□□□□□ -1.25
PABPC1-220ENST00000522658 RBM47A0AV96 593 aaKnown RBP7.25□□□□□ -1.25
PABPC1-220ENST00000522658 PRR33A8MZF0 331 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 ORC4O43929 436 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 GJB5O95377 273 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 MED26O95402 600 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 CKBP12277 381 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 GLB1P16278 677 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 MX1P20591 662 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 DEFB103AP81534 67 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 CCDC178Q5BJE1 867 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 MCTP1Q6DN14 999 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 TTBK2Q6IQ55 1244 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 BTNL9Q6UXG8 535 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 MFSD6Q6ZSS7 791 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 GJD3Q8N144 294 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 COPS5Q92905 334 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 UPF3BQ9BZI7 483 aaKnown RBP7.25□□□□□ -1.25
PABPC1-220ENST00000522658 KAT14Q9H8E8 782 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 PCMTD2Q9NV79 361 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 FAM13BQ9NYF5 915 aa7.25□□□□□ -1.25
PABPC1-220ENST00000522658 KCNK4Q9NYG8 393 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms