RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 DYNC1I1O14576 645 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 KLRC4O43908 158 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 COL6A1P12109 1028 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 TNNT1P13805 278 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 PLCG1P19174 1290 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 ITGA7Q13683 1181 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 FAM47CQ5HY64 1035 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 PIGOQ8TEQ8 1089 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 ATP8B4Q8TF62 1192 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 LRRC15Q8TF66 581 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 C16orf45Q96MC5 204 aaPredicted RBP24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 PNMA5Q96PV4 448 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 SEPT9Q9UHD8 586 aaPredicted RBP24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 CTNND2Q9UQB3 1225 aa24.41■■□□□ 1.5
PTP4A3-204ENST00000521578 USP27XA6NNY8 438 aa24.4■■□□□ 1.5
PTP4A3-204ENST00000521578 RHOBTB3O94955 611 aa24.4■■□□□ 1.5
PTP4A3-204ENST00000521578 STBD1O95210 358 aa24.4■■□□□ 1.5
PTP4A3-204ENST00000521578 ATN1P54259 1190 aaPredicted RBP24.4■■□□□ 1.5
PTP4A3-204ENST00000521578 PAK1Q13153 545 aa24.4■■□□□ 1.5
PTP4A3-204ENST00000521578 GRB10Q13322 594 aa24.4■■□□□ 1.5
PTP4A3-204ENST00000521578 XKR3Q5GH77 459 aa24.4■■□□□ 1.5
PTP4A3-204ENST00000521578 C7orf31Q8N865 590 aa24.4■■□□□ 1.5
PTP4A3-204ENST00000521578 SH2D3AQ9BRG2 576 aa24.4■■□□□ 1.5
PTP4A3-204ENST00000521578 C11orf49Q9H6J7 331 aa24.4■■□□□ 1.5
PTP4A3-204ENST00000521578 SMIM10L2AP0DMW4 78 aa24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 SMIM10L2BP0DMW5 78 aa24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 YWHABP31946 246 aaKnown RBP24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 E4F1Q66K89 784 aaPredicted RBP24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 ANO5Q75V66 913 aa24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 NECAB2Q7Z6G3 386 aa24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 ADSSL1Q8N142 457 aa24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 BBXQ8WY36 941 aaPredicted RBP24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 FAM167AQ96KS9 214 aa24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 C7orf25Q9BPX7 421 aa24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 GTPBP4Q9BZE4 634 aaKnown RBP24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 NRBP2Q9NSY0 501 aa24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 HDAC6Q9UBN7 1215 aa24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 KAT6AQ92794 2004 aa24.39■■□□□ 1.5
PTP4A3-204ENST00000521578 KDM3AQ9Y4C1 1321 aa24.39■■□□□ 1.49
PTP4A3-204ENST00000521578 A0A0U1RQG5 324 aaPredicted RBP24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 LRRC10BA6NIK2 292 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 LYPLA2O95372 231 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 INSRRP14616 1297 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 KMT5BQ4FZB7 885 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 PLA2G4FQ68DD2 849 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 NELFBQ8WX92 580 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 NACC1Q96RE7 527 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 NT5C3AQ9H0P0 336 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 LIMA1Q9UHB6 759 aaKnown RBP24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 HBP1O60381 514 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 PRCPP42785 496 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 IGBP1P78318 339 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 SPAG1Q07617 926 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 PPFIA1Q13136 1202 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 HYIQ5T013 277 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 KCNK18Q7Z418 384 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 TRAPPC12Q8WVT3 735 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 SETD4Q9NVD3 440 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 PAXBP1Q9Y5B6 917 aa24.38■■□□□ 1.49
PTP4A3-204ENST00000521578 E9PMD0 336 aa24.37■■□□□ 1.49
PTP4A3-204ENST00000521578 MUTP22033 750 aa24.37■■□□□ 1.49
PTP4A3-204ENST00000521578 PBX1P40424 430 aa24.37■■□□□ 1.49
PTP4A3-204ENST00000521578 NPEPPSP55786 919 aa24.37■■□□□ 1.49
PTP4A3-204ENST00000521578 TMEM119Q4V9L6 283 aa24.37■■□□□ 1.49
PTP4A3-204ENST00000521578 GDAQ9Y2T3 454 aa24.37■■□□□ 1.49
PTP4A3-204ENST00000521578 AMPD3Q01432 767 aa24.36■■□□□ 1.49
PTP4A3-204ENST00000521578 PTPN14Q15678 1187 aa24.36■■□□□ 1.49
PTP4A3-204ENST00000521578 GRIK4Q16099 956 aa24.36■■□□□ 1.49
PTP4A3-204ENST00000521578 MTERF2Q49AM1 385 aa24.36■■□□□ 1.49
PTP4A3-204ENST00000521578 NFRKBQ6P4R8 1299 aa24.36■■□□□ 1.49
PTP4A3-204ENST00000521578 OTUD6AQ7L8S5 288 aa24.36■■□□□ 1.49
PTP4A3-204ENST00000521578 UBE2Q1Q7Z7E8 422 aa24.36■■□□□ 1.49
PTP4A3-204ENST00000521578 KCTD17Q8N5Z5 321 aa24.36■■□□□ 1.49
PTP4A3-204ENST00000521578 TRIM9Q9C026 710 aa24.36■■□□□ 1.49
PTP4A3-204ENST00000521578 STK17AQ9UEE5 414 aa24.36■■□□□ 1.49
PTP4A3-204ENST00000521578 DNM3Q9UQ16 869 aa24.36■■□□□ 1.49
PTP4A3-204ENST00000521578 ZBTB42B2RXF5 422 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 KIF2AO00139 706 aaPredicted RBP24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 ARVCFO00192 962 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 HIC1Q14526 733 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 FILIP1LQ4L180 1135 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 XKR9Q5GH70 373 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 SLC39A5Q6ZMH5 540 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 LMBR1Q8WVP7 490 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 NIFKQ9BYG3 293 aaKnown RBP24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 TRIP12Q14669 1992 aaPredicted RBP24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 ZNF200P98182 395 aaPredicted RBP24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 CEP135Q66GS9 1140 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 TMEM139Q8IV31 216 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 SLC43A3Q8NBI5 491 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 CCDC47Q96A33 483 aaKnown RBP24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 ZBTB10Q96DT7 871 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 CEP170P1Q96L14 293 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 CCDC43Q96MW1 224 aaKnown RBP24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 CYP26B1Q9NR63 512 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 TRMT1Q9NXH9 659 aaKnown RBP24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 GTF2IRD1Q9UHL9 959 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 NRCAMQ92823 1304 aa24.35■■□□□ 1.49
PTP4A3-204ENST00000521578 C17orf102A2RUQ5 167 aa24.34■■□□□ 1.49
PTP4A3-204ENST00000521578 CCP110O43303 1012 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms