RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 SLC1A4P43007 532 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 SP2Q02086 613 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 IKQ13123 557 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 HTR4Q13639 388 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 SMC1AQ14683 1233 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 NONOQ15233 471 aaKnown RBP eCLIP8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 NFKBIBQ15653 356 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 RCSD1Q6JBY9 416 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 FAM160A2Q8N612 972 aaPredicted RBP8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 LMBR1Q8WVP7 490 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 AUTS2Q8WXX7 1259 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 NXPE3Q969Y0 559 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 SHDQ96IW2 340 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 KLK13Q9UKR3 277 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 ISY1Q9ULR0 285 aaKnown RBP8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 EXOC6BQ9Y2D4 811 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 MSRB2Q9Y3D2 182 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 CDY2AQ9Y6F7 541 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 NRCAMQ92823 1304 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 F5P12259 2224 aa8.48□□□□□ -1.05
CTNNA1-227ENST00000521387 GREB1Q4ZG55 1949 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 KIAA1217Q5T5P2 1943 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 LOXHD1Q8IVV2 1947 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 CXCL14O95715 111 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 LGALS2P05162 132 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 ZNF806P0C7X5 589 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 SDSP20132 328 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 IBSPP21815 317 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 GBP2P32456 591 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 SLC16A2P36021 539 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 MAGEA9P43362 315 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 MLF2Q15773 248 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 SLC44A4Q53GD3 710 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 CELF3Q5SZQ8 465 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 SYDE2Q5VT97 1194 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 KIAA1211LQ6NV74 962 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 KCNT2Q6UVM3 1135 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 CABP7Q86V35 215 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 SSH3Q8TE77 659 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 HNRNPLLQ8WVV9 542 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 LRIG1Q96JA1 1093 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 SPATA33Q96N06 139 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 KIF2CQ99661 725 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 SMOC1Q9H4F8 434 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 RNF19AQ9NV58 838 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 PADI3Q9ULW8 664 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 TELO2Q9Y4R8 837 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 NUMBLQ9Y6R0 609 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 SALL3Q9BXA9 1300 aa8.47□□□□□ -1.05
CTNNA1-227ENST00000521387 UBR5O95071 2799 aaPredicted RBP8.46□□□□□ -1.05
CTNNA1-227ENST00000521387 PRDM1O75626 825 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 FGFR1P11362 822 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 LAG3P18627 525 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 HOXC13P31276 330 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 RPS9P46781 194 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 SARSP49591 514 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 PDE1AP54750 535 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 ARHGAP4P98171 946 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 KCNC4Q03721 635 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 PRKCQQ04759 706 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 ZBTB41Q5SVQ8 909 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 SH3PXD2AQ5TCZ1 1133 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 GLG1Q92896 1179 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 CRELD1Q96HD1 420 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 MPHOSPH6Q99547 160 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 FTHL17Q9BXU8 183 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 ARRDC1-AS1Q9H2J1 176 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 OSBPL3Q9H4L5 887 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 SFXN1Q9H9B4 322 aa8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 WDR6Q9NNW5 1121 aaKnown RBP8.46□□□□□ -1.06
CTNNA1-227ENST00000521387 URB1O60287 2271 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 AXIN1O15169 862 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 GGPS1O95749 300 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 LAMP2P13473 410 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 DEKP35659 375 aaKnown RBP8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 STXBP2Q15833 593 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 PLA2G2CQ5R387 149 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 BTNL9Q6UXG8 535 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 C15orf39Q6ZRI6 1047 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 TRIM50Q86XT4 487 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 SLC39A11Q8N1S5 342 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 C12orf50Q8NA57 414 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 SYTL5Q8TDW5 730 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 DNAJB3Q8WWF6 145 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 GPKOWQ92917 476 aaPredicted RBP eCLIP8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 SNX21Q969T3 373 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 ZDHHC16Q969W1 377 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 ZBTB10Q96DT7 871 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 KLHL5Q96PQ7 755 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 LRRCC1Q9C099 1032 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 MKNK2Q9HBH9 465 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 FAM217BQ9NTX9 383 aaPredicted RBP8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 LRFN2Q9ULH4 789 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 PCDHB7Q9Y5E2 793 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 MRVI1Q9Y6F6 885 aa8.45□□□□□ -1.06
CTNNA1-227ENST00000521387 PCNX2A6NKB5 2137 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 FAM221BA6H8Z2 402 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 CHURC1-FNTBB4DL54 471 aa8.44□□□□□ -1.06
CTNNA1-227ENST00000521387 B4DLN1 442 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms