RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 RSPH3Q86UC2 560 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 ZNF713Q8N859 430 aaPredicted RBP10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 DNAJB3Q8WWF6 145 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 ZBTB10Q96DT7 871 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 PRIMPOLQ96LW4 560 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 YME1L1Q96TA2 773 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 ANO3Q9BYT9 981 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 GLT8D2Q9H1C3 349 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 AGO4Q9HCK5 861 aaKnown RBP10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 CYLDQ9NQC7 956 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 TMEM260Q9NX78 707 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 SLC9A2Q9UBY0 812 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 TUBE1Q9UJT0 475 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 NCOR1O75376 2440 aa10.57□□□□□ -0.72
CTNNA1-221ENST00000520339 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 ENPP3O14638 875 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 SIAH2O43255 324 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 UPP2O95045 317 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 CPA1P15085 419 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 ACTR2P61160 394 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 IGBP1P78318 339 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 AP3B2Q13367 1082 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 PLCB4Q15147 1175 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 PFKFB3Q16875 520 aaPredicted RBP10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 EPC2Q52LR7 807 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 FBXO47Q5MNV8 452 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 PLPPR4Q7Z2D5 763 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 SAMD11Q96NU1 681 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 SDF4Q9BRK5 362 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 AGO3Q9H9G7 860 aaKnown RBP10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 PCDHA2Q9Y5H9 948 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 CDY2AQ9Y6F7 541 aa10.56□□□□□ -0.72
CTNNA1-221ENST00000520339 KIAA1217Q5T5P2 1943 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 IGKV6D-21A0A0A0MT36 114 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 CCDC196A0A1B0GTZ2 297 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 FAM86B1E9PN63 330 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 H3BNC9 293 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 WNT7AO00755 349 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 ADAMTS3O15072 1205 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 CCNE2O96020 404 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 RPLP2P05387 115 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 CYP3A4P08684 503 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 FAM86B2P0C5J1 330 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 SCG2P13521 617 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 HSPA4P34932 840 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 STAT5BP51692 787 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 MRPS6P82932 125 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 APOBRQ0VD83 1088 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 MMRN1Q13201 1228 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 PKN1Q16512 942 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 JAKMIP3Q5VZ66 844 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 NIPA1Q7RTP0 329 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 TMEM192Q8IY95 271 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 FBXL16Q8N461 479 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 CRYGNQ8WXF5 182 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 TNPO1Q92973 898 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 MRPL38Q96DV4 380 aaKnown RBP10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 IL17RAQ96F46 866 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 MRGPRX2Q96LB1 330 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 AZI2Q9H6S1 392 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 SNX14Q9Y5W7 946 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 SQORQ9Y6N5 450 aa10.55□□□□□ -0.72
CTNNA1-221ENST00000520339 TRIP12Q14669 1992 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 ESYT2A0FGR8 921 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 DHX15O43143 795 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 PRPF3O43395 683 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 EIF5BO60841 1220 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 ADH1CP00326 375 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 LINC00271P0C7V0 271 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 ZNF76P36508 570 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 SCNN1AP37088 669 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 SLC26A2P50443 739 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 METAP2P50579 478 aaKnown RBP eCLIP10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 GPM6BQ13491 265 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 PTPROQ16827 1216 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 IER5Q5VY09 327 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 ABHD15Q6UXT9 468 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 TSHZ1Q6ZSZ6 1077 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 Q6ZUG5 572 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 RTN4RL1Q86UN2 441 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 PLA2G4DQ86XP0 818 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 TSEN2Q8NCE0 465 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 TRAPPC12Q8WVT3 735 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 BRF1Q92994 677 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 JAKMIP1Q96N16 626 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 AGXT2Q9BYV1 514 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 ZMYND12Q9H0C1 365 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 FAM49AQ9H0Q0 323 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 UBE2ZQ9H832 354 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 RC3H2Q9HBD1 1191 aaKnown RBP10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 NAP1L2Q9ULW6 460 aaPredicted RBP10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 TRPV2Q9Y5S1 764 aa10.54□□□□□ -0.72
CTNNA1-221ENST00000520339 TANC1Q9C0D5 1861 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 IGLV3-22A0A075B6J6 115 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 SMIM35A0A1B0GVV1 85 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 HBP1O60381 514 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 RB1P06400 928 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 RPS6KB1P23443 525 aa10.53□□□□□ -0.72
CTNNA1-221ENST00000520339 CD52P31358 61 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms