RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	PPP2R5A	Q15172	486 aa		11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	LRRC26	Q2I0M4	334 aa		11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	SKOR2	Q2VWA4	1001 aa	Predicted RBP	11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	TRMT1L	Q7Z2T5	733 aa	Known RBP	11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	GPBP1	Q86WP2	473 aa		11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	METTL13	Q8N6R0	699 aa		11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	USP38	Q8NB14	1042 aa		11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	SPIRE2	Q8WWL2	714 aa		11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	DDX12P	Q92771	950 aa		11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	TRIM9	Q9C026	710 aa		11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	TRPV6	Q9H1D0	765 aa		11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	SUGCT	Q9HAC7	445 aa		11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	TRMT13	Q9NUP7	481 aa	Known RBP	11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	LARS	Q9P2J5	1176 aa	Known RBP	11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	SERTAD1	Q9UHV2	236 aa		11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534	COL4A3BP	Q9Y5P4	624 aa		11.98	□□□□□ -0.49
CHTF8-206	ENST00000519534		A0A087WWV3	80 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	TMEM150B	A6NC51	233 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	MYMK	A6NI61	221 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534		H0YCG3	227 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	KIAA0355	O15063	1070 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	GTPBP6	O43824	516 aa	Predicted RBP	11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	CLTB	P09497	229 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	LIG1	P18858	919 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	CRYBB1	P53674	252 aa	Predicted RBP	11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	ATN1	P54259	1190 aa	Predicted RBP	11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	CHMP4BP1	P59074	171 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	ZNF200	P98182	395 aa	Predicted RBP	11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	TFDP1	Q14186	410 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	TRIM71	Q2Q1W2	868 aa	Known RBP	11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	TRIM60	Q495X7	471 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	SPATA20	Q8TB22	786 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	TRAPPC12	Q8WVT3	735 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	PRPF31	Q8WWY3	499 aa	Known RBP	11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	DNAJC19	Q96DA6	116 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	RUSC1	Q9BVN2	902 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	INO80B	Q9C086	356 aa	Predicted RBP	11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	ST6GALNAC4	Q9H4F1	302 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	PARVG	Q9HBI0	331 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	DACT1	Q9NYF0	836 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	TBX21	Q9UL17	535 aa		11.97	□□□□□ -0.49
CHTF8-206	ENST00000519534	USO1	O60763	962 aa	Known RBP	11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	PQBP1	O60828	265 aa	Known RBP	11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	GPR32	O75388	356 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	SSB	P05455	408 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	KRT18	P05783	430 aa	Known RBP	11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	PLS3	P13797	630 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	NAMPT	P43490	491 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	EFNA5	P52803	228 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	SMTN	P53814	917 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	MAPK7	Q13164	816 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	PSMD2	Q13200	908 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	ODR4	Q5SWX8	454 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	FAM102B	Q5T8I3	360 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	NT5DC1	Q5TFE4	455 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	UNC13D	Q70J99	1090 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	CCDC65	Q8IXS2	484 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	DAW1	Q8N136	415 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	DNAJB3	Q8WWF6	145 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	IFT74	Q96LB3	600 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	GSDMA	Q96QA5	445 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	SH2D3A	Q9BRG2	576 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	REEP2	Q9BRK0	252 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	CELF4	Q9BZC1	486 aa	Known RBP	11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	C2orf40	Q9H1Z8	148 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	OLFML3	Q9NRN5	406 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534	TMEM39A	Q9NV64	488 aa		11.96	□□□□□ -0.49
CHTF8-206	ENST00000519534		M0QZ92	97 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	HIP1R	O75146	1068 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	SMC2	O95347	1197 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	TIMP1	P01033	207 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	CKB	P12277	381 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	SELP	P16109	830 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	GLRA2	P23416	452 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	EIF4B	P23588	611 aa	Known RBP	11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	RFC2	P35250	354 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	SARS	P49591	514 aa	Known RBP	11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	GPC3	P51654	580 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	SOX10	P56693	466 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	PTEN	P60484	403 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	MRPS6	P82932	125 aa	Known RBP	11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	EHHADH	Q08426	723 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	LAMTOR4	Q0VGL1	99 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	DPYD	Q12882	1025 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	DMP1	Q13316	513 aa	Predicted RBP	11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	ALCAM	Q13740	583 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	KCNB1	Q14721	858 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	POSTN	Q15063	836 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	KLHL40	Q2TBA0	621 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	RUFY4	Q6ZNE9	571 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	SRGAP1	Q7Z6B7	1085 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	LRRC71	Q8N4P6	559 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	DHX38	Q92620	1227 aa	Known RBP	11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	CCDC47	Q96A33	483 aa	Known RBP	11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	TMEM143	Q96AN5	459 aa		11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	NOC4L	Q9BVI4	516 aa	Known RBP	11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	GCOM2	Q9BZD3	368 aa	Predicted RBP	11.95	□□□□□ -0.5
CHTF8-206	ENST00000519534	ADAMTS10	Q9H324	1103 aa		11.95	□□□□□ -0.5

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