RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 HABP4Q5JVS0 413 aaKnown RBP6.3□□□□□ -1.4
HDAC2-204ENST00000518756 TEPPQ6URK8 271 aa6.3□□□□□ -1.4
HDAC2-204ENST00000518756 ATF7IPQ6VMQ6 1270 aa6.3□□□□□ -1.4
HDAC2-204ENST00000518756 ITPRIPQ8IWB1 547 aa6.3□□□□□ -1.4
HDAC2-204ENST00000518756 ANKRD13AQ8IZ07 590 aa6.3□□□□□ -1.4
HDAC2-204ENST00000518756 TXNDC5Q8NBS9 432 aaKnown RBP6.3□□□□□ -1.4
HDAC2-204ENST00000518756 EXOC2Q96KP1 924 aa6.3□□□□□ -1.4
HDAC2-204ENST00000518756 KCNJ15Q99712 375 aa6.3□□□□□ -1.4
HDAC2-204ENST00000518756 ST6GALNAC2Q9UJ37 374 aa6.3□□□□□ -1.4
HDAC2-204ENST00000518756 MRPS23Q9Y3D9 190 aaKnown RBP6.3□□□□□ -1.4
HDAC2-204ENST00000518756 TRAF6Q9Y4K3 522 aa6.3□□□□□ -1.4
HDAC2-204ENST00000518756 SLC27A2O14975 620 aa6.29□□□□□ -1.4
HDAC2-204ENST00000518756 FYB1O15117 783 aa6.29□□□□□ -1.4
HDAC2-204ENST00000518756 LRG1P02750 347 aa6.29□□□□□ -1.4
HDAC2-204ENST00000518756 C6orf222P0C671 652 aaPredicted RBP6.29□□□□□ -1.4
HDAC2-204ENST00000518756 EXOSC9Q06265 439 aaKnown RBP6.29□□□□□ -1.4
HDAC2-204ENST00000518756 L1TD1Q5T7N2 865 aaKnown RBP6.29□□□□□ -1.4
HDAC2-204ENST00000518756 PRAMEF18Q5VWM3 479 aa6.29□□□□□ -1.4
HDAC2-204ENST00000518756 LIMS2Q7Z4I7 341 aa6.29□□□□□ -1.4
HDAC2-204ENST00000518756 MTDHQ86UE4 582 aaKnown RBP6.29□□□□□ -1.4
HDAC2-204ENST00000518756 ARHGAP45Q92619 1136 aa6.29□□□□□ -1.4
HDAC2-204ENST00000518756 GCC1Q96CN9 775 aa6.29□□□□□ -1.4
HDAC2-204ENST00000518756 LCORQ96JN0 433 aaPredicted RBP6.29□□□□□ -1.4
HDAC2-204ENST00000518756 PLEKHF1Q96S99 279 aa6.29□□□□□ -1.4
HDAC2-204ENST00000518756 TMEM209Q96SK2 561 aa6.29□□□□□ -1.4
HDAC2-204ENST00000518756 DNAJC7Q99615 494 aa6.29□□□□□ -1.4
HDAC2-204ENST00000518756 PDGFDQ9GZP0 370 aaPredicted RBP6.29□□□□□ -1.4
HDAC2-204ENST00000518756 IPPKQ9H8X2 491 aa6.29□□□□□ -1.4
HDAC2-204ENST00000518756 DSEQ9UL01 958 aa6.29□□□□□ -1.4
HDAC2-204ENST00000518756 CDC42BPGQ6DT37 1551 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 EDC4Q6P2E9 1401 aaKnown RBP6.28□□□□□ -1.4
HDAC2-204ENST00000518756 WNT9AO14904 365 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 CYP7B1O75881 506 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 COL6A2P12110 1019 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 ADAM9Q13443 819 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 PRR31Q5SQ13 230 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 HSCBQ8IWL3 235 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 JMYQ8N9B5 988 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 SLC16A11Q8NCK7 471 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 THAP3Q8WTV1 239 aaPredicted RBP6.28□□□□□ -1.4
HDAC2-204ENST00000518756 DVL3Q92997 716 aaPredicted RBP6.28□□□□□ -1.4
HDAC2-204ENST00000518756 KISS1RQ969F8 398 aaPredicted RBP6.28□□□□□ -1.4
HDAC2-204ENST00000518756 COG3Q96JB2 828 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 ZSWIM3Q96MP5 696 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 CLIC6Q96NY7 704 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 WRNIP1Q96S55 665 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 DNAJC2Q99543 621 aaKnown RBP6.28□□□□□ -1.4
HDAC2-204ENST00000518756 C1QTNF3Q9BXJ4 246 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 OSBPL2Q9H1P3 480 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 PNPLA6Q8IY17 1366 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 ITSN1Q15811 1721 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 KNDC1Q76NI1 1749 aa6.28□□□□□ -1.4
HDAC2-204ENST00000518756 SPATA31D1Q6ZQQ2 1576 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 FAM135BQ49AJ0 1406 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 RIMS2Q9UQ26 1411 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 CCDC163A0A0D9SF12 145 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 C1QTNF3-AMACRE9PGA6 284 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 NKRFO15226 690 aaKnown RBP eCLIP6.27□□□□□ -1.41
HDAC2-204ENST00000518756 CYP1A1P04798 512 aaPredicted RBP6.27□□□□□ -1.41
HDAC2-204ENST00000518756 APPP05067 770 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 EPHA5P54756 1037 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 GUCY1A3Q02108 690 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 TUSC3Q13454 348 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 NFE2L2Q16236 605 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 ZSWIM2Q8NEG5 633 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 CLEC4DQ8WXI8 215 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 API5Q9BZZ5 524 aaKnown RBP6.27□□□□□ -1.41
HDAC2-204ENST00000518756 IFT57Q9NWB7 429 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 NOB1Q9ULX3 412 aaKnown RBP6.27□□□□□ -1.41
HDAC2-204ENST00000518756 AATKQ6ZMQ8 1374 aa6.27□□□□□ -1.41
HDAC2-204ENST00000518756 MAP2P11137 1827 aaKnown RBP6.27□□□□□ -1.41
HDAC2-204ENST00000518756 PPIP5K1Q6PFW1 1433 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 YEATS2Q9ULM3 1422 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 ARHGEF40Q8TER5 1519 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 ARVCFO00192 962 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 LAMTOR5O43504 91 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 EFCAB14O75071 495 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 C6P13671 934 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 CASC1Q6TDU7 716 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 KCTD1Q719H9 257 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.26□□□□□ -1.41
HDAC2-204ENST00000518756 PLEKHH3Q7Z736 793 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 PCDH19Q8TAB3 1148 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 SH3RF3Q8TEJ3 882 aaPredicted RBP6.26□□□□□ -1.41
HDAC2-204ENST00000518756 FBXW5Q969U6 566 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 C22orf23Q9BZE7 217 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 L2HGDHQ9H9P8 463 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 PCDHA8Q9Y5H6 950 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 KIF24Q5T7B8 1368 aa6.26□□□□□ -1.41
HDAC2-204ENST00000518756 COL3A1P02461 1466 aaPredicted RBP6.26□□□□□ -1.41
HDAC2-204ENST00000518756 GSTA4O15217 222 aa6.25□□□□□ -1.41
HDAC2-204ENST00000518756 B4GALT3O60512 393 aa6.25□□□□□ -1.41
HDAC2-204ENST00000518756 TRIM27P14373 513 aa6.25□□□□□ -1.41
HDAC2-204ENST00000518756 FAHP16930 419 aa6.25□□□□□ -1.41
HDAC2-204ENST00000518756 PRKAR2BP31323 418 aa6.25□□□□□ -1.41
HDAC2-204ENST00000518756 SETQ01105 290 aaPredicted RBP6.25□□□□□ -1.41
HDAC2-204ENST00000518756 GRIN1Q05586 938 aa6.25□□□□□ -1.41
HDAC2-204ENST00000518756 PAN2Q504Q3 1202 aaKnown RBP6.25□□□□□ -1.41
HDAC2-204ENST00000518756 C2orf27AQ580R0 203 aa6.25□□□□□ -1.41
HDAC2-204ENST00000518756 VASNQ6EMK4 673 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms