RNA–Protein interactions for RNA: ENST00000517114.1

SCARNA16.5-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.5-201ENST00000517114 SLC7A6OSQ96CW6 309 aaPredicted RBP0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SGSM3Q96HU1 749 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 EXOC2Q96KP1 924 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 BBC3Q96PG8 261 aaPredicted RBP0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 GBP4Q96PP9 640 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 MPHOSPH9Q99550 1183 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 CDC6Q99741 560 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 TINF2Q9BSI4 451 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SPATA9Q9BWV2 254 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 R3HDMLQ9H3Y0 253 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ZNF768Q9H5H4 540 aaKnown RBP0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 RIOX1Q9H6W3 641 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 MSL2Q9HCI7 577 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 IL23AQ9NPF7 189 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 NCDNQ9UBB6 729 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 TRPS1Q9UHF7 1281 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ZNHIT2Q9UHR6 403 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 PFDN2Q9UHV9 154 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 DNAI1Q9UI46 699 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SORCS3Q9UPU3 1222 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 COQ6Q9Y2Z9 468 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 R3HCC1Q9Y3T6 440 aaKnown RBP0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 PCDHA9Q9Y5H5 950 aa0.9□□□□□ -2.27
SCARNA16.5-201ENST00000517114 TRBV23-1A0A0A0MS06 115 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 CENPVL1A0A0U1RR11 272 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 PMS2P1A4D2B8 440 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ZAR1LA6NP61 321 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 GOLGA8BA8MQT2 603 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 KIAA0355O15063 1070 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 LPXNO60711 386 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 KRT37O76014 449 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 TOX4O94842 621 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SCAF4O95104 1147 aaKnown RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ABHD16AO95870 558 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 PEX11BO96011 259 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 CFBP00751 764 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 PRLP01236 227 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ERBB2P04626 1255 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 FAM153BP0C7A2 387 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 HNRNPLP14866 589 aaKnown RBP eCLIP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 HK1P19367 917 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 APEX1P27695 318 aaKnown RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 PTGS2P35354 604 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 PLA2G5P39877 138 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 PTH2RP49190 550 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 CLK3P49761 638 aaKnown RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ANTXR2P58335 489 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 KRTAP10-11P60412 298 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 FAM189BP81408 668 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 LACTBP83111 547 aaPredicted RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SMAD3P84022 425 aaKnown RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 IRF9Q00978 393 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SLC6A3Q01959 620 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ALDH6A1Q02252 535 aaKnown RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ARID5AQ03989 594 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SSRP1Q08945 709 aaKnown RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 MAP3K12Q12852 859 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 FAM47CQ5HY64 1035 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 RABL3Q5HYI8 236 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 COLEC12Q5KU26 742 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 LY6G5CQ5SRR4 150 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 NBPF6Q5VWK0 638 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 KRT40Q6A162 431 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SP5Q6BEB4 398 aaPredicted RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SLFN12LQ6IEE8 588 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 KLHDC10Q6PID8 442 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 OLFML1Q6UWY5 402 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 Q6YL49 198 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ZNF662Q6ZS27 426 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 LRRC55Q6ZSA7 311 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 HTR3DQ70Z44 454 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 C16orf59Q7L2K0 433 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 MAMDC2Q7Z304 686 aaPredicted RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 RTN4RL1Q86UN2 441 aaPredicted RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SYNE4Q8N205 404 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ST13P5Q8NFI4 369 aaPredicted RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 HAS1Q92839 578 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 PTPRN2Q92932 1015 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 LENG9Q96B70 501 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ARL8AQ96BM9 186 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 FOXRED1Q96CU9 486 aaPredicted RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 NBPF4Q96M43 638 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ZNF512Q96ME7 567 aaPredicted RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 MNTQ99583 582 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 FOXB1Q99853 325 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 TCF25Q9BQ70 676 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 CPEB1Q9BZB8 566 aaKnown RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SLC6A15Q9H2J7 730 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SYNPO2LQ9H987 977 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SLC52A2Q9HAB3 445 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ADARB2Q9NS39 739 aaKnown RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 KCNH7Q9NS40 1196 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ANKFY1Q9P2R3 1169 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 SAE1Q9UBE0 346 aaPredicted RBP0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 NDOR1Q9UHB4 597 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 RCAN3Q9UKA8 241 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 DENND2AQ9ULE3 1009 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 ASB1Q9Y576 335 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 B3GALT1Q9Y5Z6 326 aa0.89□□□□□ -2.27
SCARNA16.5-201ENST00000517114 HS3ST4Q9Y661 456 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms