RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 SEZ6L2Q6UXD5 910 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 SYTL1Q8IYJ3 562 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 AGGF1Q8N302 714 aaeCLIP3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 USHBP1Q8N6Y0 703 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 MARCH10Q8NA82 808 aaPredicted RBP3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 ZNF527Q8NB42 609 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 GIMAP8Q8ND71 665 aaPredicted RBP3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 KLHDC4Q8TBB5 520 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 PIWIL2Q8TC59 973 aaKnown RBP3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 BRI3BPQ8WY22 251 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 APIPQ96GX9 242 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 TMEM41AQ96HV5 264 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 RAX2Q96IS3 184 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 DUSP23Q9BVJ7 150 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 PLVAPQ9BX97 442 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 GPR62Q9BZJ7 368 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 LRRC27Q9C0I9 530 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 MRPL18Q9H0U6 180 aaKnown RBP3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 OSBPL5Q9H0X9 879 aaPredicted RBP3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 PRDM12Q9H4Q4 367 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 ATP6V0A4Q9HBG4 840 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 IFT122Q9HBG6 1241 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 KIAA1586Q9HCI6 787 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 PRDM5Q9NQX1 630 aaPredicted RBP3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 RASSF1Q9NS23 344 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 SMC4Q9NTJ3 1288 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 BTG4Q9NY30 223 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 DPP7Q9UHL4 492 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 MAGED2Q9UNF1 606 aaPredicted RBP3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 SRPK3Q9UPE1 567 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 STXBP5LQ9Y2K9 1186 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 CRYL1Q9Y2S2 319 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 SLC45A1Q9Y2W3 748 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 NR2E3Q9Y5X4 410 aa3.05□□□□□ -1.92
SCARNA3-201ENST00000517097 ITIH6Q6UXX5 1313 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 A0A088AWK7 358 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 SSU72P8A0A1W2PR75 194 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 POM121BA6NF01 834 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 RRN3P2A6NIE6 340 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 FOXN3O00409 490 aaPredicted RBP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 FRS3O43559 492 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 GAS2O43903 313 aaKnown RBP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 LEFTY1O75610 366 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 CD4P01730 458 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 IFIT1P09914 478 aaKnown RBP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 DHRS4L1P0CG22 281 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 ZNF865P0CJ78 1059 aaPredicted RBP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 RPL17P18621 184 aaKnown RBP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 CAPN3P20807 821 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 FPR2P25090 351 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 PDIA3P30101 505 aaKnown RBP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 FNTBP49356 437 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 MAP2K6P52564 334 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 LGALS4P56470 323 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 PCBP3P57721 371 aaKnown RBP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 TUSC3Q13454 348 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 CNGB1Q14028 1251 aaPredicted RBP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 DOC2BQ14184 412 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 POSTNQ15063 836 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 CCDC96Q2M329 555 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 FIGNQ5HY92 759 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 ZBTB41Q5SVQ8 909 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 CATSPEREQ5SY80 951 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 TTLL5Q6EMB2 1281 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 GGT6Q6P531 493 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 LMBR1LQ6UX01 489 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 C22orf34Q6ZV56 151 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 FAM214BQ7L5A3 538 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 TBC1D1Q86TI0 1168 aaPredicted RBP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 PHYKPLQ8IUZ5 450 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 LIX1LQ8IVB5 337 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 NLGN4XQ8N0W4 816 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 Q8N1Y9 231 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 LINC00116Q8NCU8 138 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 PLBD2Q8NHP8 589 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 TSPEARQ8WU66 669 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 FBLIM1Q8WUP2 373 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 TRAPPC12Q8WVT3 735 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 NRG4Q8WWG1 115 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 EZH1Q92800 747 aaPredicted RBP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 RPGRQ92834 1020 aaKnown RBP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 NT5C1BQ96P26 610 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 SERINC2Q96SA4 455 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 TTLL2Q9BWV7 592 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 FOXP3Q9BZS1 431 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 CD244Q9BZW8 370 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 DUSP15Q9H1R2 295 aaPredicted RBP3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 KCTD10Q9H3F6 313 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 POFUT1Q9H488 388 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 ITM2CQ9NQX7 267 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 DSEQ9UL01 958 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 TCFL5Q9UL49 500 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 ATP23Q9Y6H3 246 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 CAPN6Q9Y6Q1 641 aa3.04□□□□□ -1.92
SCARNA3-201ENST00000517097 FAM229AH3BQW9 127 aa3.03□□□□□ -1.92
SCARNA3-201ENST00000517097 EIF3FO00303 357 aaPredicted RBP3.03□□□□□ -1.92
SCARNA3-201ENST00000517097 DDX3XO00571 662 aaKnown RBP eCLIP3.03□□□□□ -1.92
SCARNA3-201ENST00000517097 FFAR2O15552 330 aa3.03□□□□□ -1.92
SCARNA3-201ENST00000517097 SART1O43290 800 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms