RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 KLF10Q13118 480 aa4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 RIN1Q13671 783 aa4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 KRT40Q6A162 431 aa4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 SLFN12LQ6IEE8 588 aa4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 RTN4RL1Q86UN2 441 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 GSPT2Q8IYD1 628 aaKnown RBP4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 GPR135Q8IZ08 494 aa4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 ANKRD35Q8N283 1001 aa4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 FOXRED1Q96CU9 486 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 MAML3Q96JK9 1138 aa4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 TUBGCP5Q96RT8 1024 aa4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 SLC6A15Q9H2J7 730 aa4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 PARPBPQ9NWS1 579 aa4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 MAGEL2Q9UJ55 1249 aa4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 CTDP1Q9Y5B0 961 aaPredicted RBP4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 RBM8AQ9Y5S9 174 aaKnown RBP4.25□□□□□ -1.73
RNU6-1088P-201ENST00000516850 GLRX3O76003 335 aaKnown RBP4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 PRLP01236 227 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 RGS3P49796 1198 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 BCAR1P56945 870 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 TUBA3CQ13748 450 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 BMS1Q14692 1282 aaKnown RBP4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 PIK3R6Q5UE93 754 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 PRAMEF9Q5VWM5 478 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 TUBA3EQ6PEY2 450 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 ZNF662Q6ZS27 426 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 IL17DQ8TAD2 202 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 RPL10LQ96L21 214 aaKnown RBP4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 MENTQ9BUN1 341 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 KCMF1Q9P0J7 381 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 RCAN3Q9UKA8 241 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 ZKSCAN5Q9Y2L8 839 aa4.24□□□□□ -1.73
RNU6-1088P-201ENST00000516850 PLSCR1O15162 318 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 ADH4P08319 380 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 C1SP09871 688 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 MAKP20794 623 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 MECP2P51608 486 aaKnown RBP4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 ADCY7P51828 1080 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 BPIFB4P59827 614 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 DGCR2P98153 550 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 ADCY1Q08828 1119 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 CFAP100Q494V2 611 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 TIGD7Q6NT04 549 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 KIAA1958Q8N8K9 716 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 ANKRD53Q8N9V6 530 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 SREK1Q8WXA9 508 aaKnown RBP4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 MIEF2Q96C03 454 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 DYDC2Q96IM9 177 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 CLUHP3Q96NS8 147 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 IFT57Q9NWB7 429 aa4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 ING1Q9UK53 422 aaPredicted RBP4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 REXO2Q9Y3B8 237 aaKnown RBP4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 TNPO3Q9Y5L0 923 aaKnown RBP4.23□□□□□ -1.73
RNU6-1088P-201ENST00000516850 WDR33Q9C0J8 1336 aaKnown RBP4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 NARSO43776 548 aaKnown RBP4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 APOL3O95236 402 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 JMJD7P0C870 316 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 STAT3P40763 770 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 TCIRG1Q13488 830 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 CNGB1Q14028 1251 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 EPHA7Q15375 998 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 KRTAP5-3Q6L8H2 238 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 TMPRSS6Q8IU80 811 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 PHYKPLQ8IUZ5 450 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 PASD1Q8IV76 773 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 ZZZ3Q8IYH5 903 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 C7orf31Q8N865 590 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 PLA2G15Q8NCC3 412 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 OR5AN1Q8NGI8 311 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 NEU4Q8WWR8 484 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 ARL8AQ96BM9 186 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 WDR92Q96MX6 357 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 TCF25Q9BQ70 676 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 ZSWIM4Q9H7M6 989 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 ZNF703Q9H7S9 590 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 AGO3Q9H9G7 860 aaKnown RBP4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 POLR3BQ9NW08 1133 aaPredicted RBP4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 B4GALT6Q9UBX8 382 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 SH3BP1Q9Y3L3 701 aa4.22□□□□□ -1.73
RNU6-1088P-201ENST00000516850 C2orf78A6NCI8 922 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 TRAF5O00463 557 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 DVL2O14641 736 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MFAP3LO75121 409 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SLC9A1P19634 815 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ANTXR2P58335 489 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ADCY2Q08462 1091 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 RRP1BQ14684 758 aaKnown RBP4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ACAP1Q15027 740 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 MAN2A1Q16706 1144 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 GAGE13Q4V321 117 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 CDCA2Q69YH5 1023 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 FAM111BQ6SJ93 734 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 GAREM2Q75VX8 874 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 BMP8AQ7Z5Y6 402 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 BCL6BQ8N143 479 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 SH3TC2Q8TF17 1288 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 ZNF483Q8TF39 744 aaPredicted RBP4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 CACTINQ8WUQ7 758 aaKnown RBP4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 C16orf92Q96LL3 132 aa4.21□□□□□ -1.74
RNU6-1088P-201ENST00000516850 TRIM8Q9BZR9 551 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms