RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 CD276Q5ZPR3 534 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 AMIGO2Q86SJ2 522 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 Q8N1Y9 231 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 ANKRD9Q96BM1 317 aaPredicted RBP0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 NOL6Q9H6R4 1146 aaKnown RBP0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 FHOD1Q9Y613 1164 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 X6R8D5 127 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 SNED1Q8TER0 1413 aa0.4□□□□□ -2.34
RNU6-539P-201ENST00000516665 SLC28A2O43868 658 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 MFAP3LO75121 409 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 PLA2G2AP14555 144 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 WT1P19544 449 aaPredicted RBP0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 APOBEC3AP31941 199 aaPredicted RBP0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 BMPR1AP36894 532 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 HNRNPKP61978 463 aaKnown RBP eCLIP0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 SCAPQ12770 1279 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 ZNF211Q13398 564 aaPredicted RBP0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 EIF4HQ15056 248 aaKnown RBP0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 INF2Q27J81 1249 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 EMC4Q5J8M3 183 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 SLC18B1Q6NT16 456 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 Q6ZNX1 250 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 RTKN2Q8IZC4 609 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 ACTRT2Q8TDY3 377 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 VCPIP1Q96JH7 1222 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 FAM84BQ96KN1 310 aaPredicted RBP0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 Q96MF0 132 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 GPHA2Q96T91 129 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 TEX101Q9BY14 249 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 LRIT1Q9P2V4 623 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 ADAMTS1Q9UHI8 967 aa0.4□□□□□ -2.35
RNU6-539P-201ENST00000516665 TTC3P53804 2025 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 UBE2QL1A1L167 161 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 C2orf71A6NGG8 1288 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 IPO13O94829 963 aaKnown RBP0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 ZNF432O94892 652 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 BPNT1O95861 308 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 ENO2P09104 434 aaPredicted RBP0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 FDXRP22570 491 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 DDX6P26196 483 aaKnown RBP eCLIP0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 ADAM8P78325 824 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 ST5P78524 1137 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 MRPS35P82673 323 aaKnown RBP0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 ATP2C1P98194 919 aaPredicted RBP0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 PLCB2Q00722 1185 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 CFHR1Q03591 330 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 DPY19L1Q2PZI1 675 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 TMEM119Q4V9L6 283 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 DCAF17Q5H9S7 520 aaPredicted RBP0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 PXDC1Q5TGL8 231 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 DCAF15Q66K64 600 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 OVOS1Q6IE37 1185 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 CEP68Q76N32 757 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 CTCFLQ8NI51 663 aaPredicted RBP0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 CLEC4DQ8WXI8 215 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 ZNF512Q96ME7 567 aaPredicted RBP0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 TMEM79Q9BSE2 394 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 SRCIN1Q9C0H9 1055 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 CLEC1BQ9P126 229 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 MCM8Q9UJA3 840 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 TLR6Q9Y2C9 796 aa0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 SF3B6Q9Y3B4 125 aaKnown RBP0.39□□□□□ -2.35
RNU6-539P-201ENST00000516665 DRGXA6NNA5 263 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 SEC24DO94855 1032 aaPredicted RBP0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 UMODP07911 640 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 CDKN2AP42771 156 aaKnown RBP0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 STAT5BP51692 787 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 MAP3K12Q12852 859 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 PPP2R5DQ14738 602 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 ASIC2Q16515 512 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 GDF7Q7Z4P5 450 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 CCDC144CPQ8IYA2 1237 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 REPS2Q8NFH8 660 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 TTLL11Q8NHH1 800 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 TRMT2BQ96GJ1 504 aaKnown RBP0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 RPL10LQ96L21 214 aaKnown RBP0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 CAMK1GQ96NX5 476 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 TIMP4Q99727 224 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 SEMA4CQ9C0C4 833 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 HAPLN2Q9GZV7 340 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 CNNM2Q9H8M5 875 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 NCOA5Q9HCD5 579 aaKnown RBP0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 SLC39A2Q9NP94 309 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 GMIPQ9P107 970 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 FBXL7Q9UJT9 491 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 TTF2Q9UNY4 1162 aaKnown RBP0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 CHST2Q9Y4C5 530 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 BACE2Q9Y5Z0 518 aa0.38□□□□□ -2.35
RNU6-539P-201ENST00000516665 TRBV23OR9-2A0A075B6M9 112 aa0.37□□□□□ -2.35
RNU6-539P-201ENST00000516665 GAGE12BA1L429 117 aa0.37□□□□□ -2.35
RNU6-539P-201ENST00000516665 GAGE12HA6NDE8 117 aa0.37□□□□□ -2.35
RNU6-539P-201ENST00000516665 RAD21O60216 631 aa0.37□□□□□ -2.35
RNU6-539P-201ENST00000516665 VAMP4O75379 141 aa0.37□□□□□ -2.35
RNU6-539P-201ENST00000516665 F13A1P00488 732 aa0.37□□□□□ -2.35
RNU6-539P-201ENST00000516665 FAHP16930 419 aa0.37□□□□□ -2.35
RNU6-539P-201ENST00000516665 CCNFP41002 786 aa0.37□□□□□ -2.35
RNU6-539P-201ENST00000516665 ADCY7P51828 1080 aa0.37□□□□□ -2.35
RNU6-539P-201ENST00000516665 IL13RA1P78552 427 aa0.37□□□□□ -2.35
RNU6-539P-201ENST00000516665 UBE3CQ15386 1083 aa0.37□□□□□ -2.35
RNU6-539P-201ENST00000516665 SEZ6Q53EL9 994 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms