RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 NOL6Q9H6R4 1146 aaKnown RBP0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 ANO2Q9NQ90 1003 aa0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 TUBA8Q9NY65 449 aaPredicted RBP0.24□□□□□ -2.37
RNU6-542P-201ENST00000516405 DOCK7Q96N67 2140 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 OTOGLQ3ZCN5 2332 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 UBE2QL1A1L167 161 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 C2orf71A6NGG8 1288 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 LINC01548A6NM66 108 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 RNASET2O00584 256 aaKnown RBP0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 MFAP3LO75121 409 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 VAMP4O75379 141 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 CDKL5O76039 1030 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 CD1AP06126 327 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 UMODP07911 640 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 T-ENOLP0DO92 83 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 PLA2G2AP14555 144 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 ADCY8P40145 1251 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 MMP13P45452 471 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 SEPHS1P49903 392 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 ADCY7P51828 1080 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 ST5P78524 1137 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 ATP2C1P98194 919 aaPredicted RBP0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 HOXA4Q00056 320 aaPredicted RBP0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 CFHR1Q03591 330 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 SLC10A2Q12908 348 aaPredicted RBP0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 ZIK1Q3SY52 487 aaPredicted RBP0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 NOL9Q5SY16 702 aaKnown RBP0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 SLC18B1Q6NT16 456 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 Q6ZNX1 250 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 CEP68Q76N32 757 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 ANKRD9Q96BM1 317 aaPredicted RBP0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 Q96MF0 132 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 CPNE5Q9HCH3 593 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 TRPM5Q9NZQ8 1165 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 MYOTQ9UBF9 498 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 PRO0461Q9UI25 63 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 BRPF3Q9ULD4 1205 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 TLR6Q9Y2C9 796 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 CHST2Q9Y4C5 530 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 FHOD1Q9Y613 1164 aa0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 MUC5BQ9HC84 5762 aaPredicted RBP0.23□□□□□ -2.37
RNU6-542P-201ENST00000516405 ZNF318Q5VUA4 2279 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 SOCS2O14508 198 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 FAHP16930 419 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 GPD1P21695 349 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 SCP2P22307 547 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 APOBEC3AP31941 199 aaPredicted RBP0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 CCNFP41002 786 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 LIG3P49916 1009 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 SF3B2Q13435 895 aaKnown RBP0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 UBE3CQ15386 1083 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 MAP3K11Q16584 847 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 DCAF17Q5H9S7 520 aaPredicted RBP0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 DCAF15Q66K64 600 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 RBM12BQ8IXT5 1001 aaKnown RBP0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 TTLL11Q8NHH1 800 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 SEMA4CQ9C0C4 833 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 CNNM2Q9H8M5 875 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 NCOA5Q9HCD5 579 aaKnown RBP0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 CLEC1BQ9P126 229 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 EIF2B4Q9UI10 523 aaKnown RBP0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 FBXL7Q9UJT9 491 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 FAM184BQ9ULE4 1060 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 SF3B6Q9Y3B4 125 aaKnown RBP0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 TENM1Q9UKZ4 2725 aa0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 FNDC1Q4ZHG4 1894 aaPredicted RBP0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 FBN1P35555 2871 aaKnown RBP0.22□□□□□ -2.37
RNU6-542P-201ENST00000516405 EVPLQ92817 2033 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 GAGE12BA1L429 117 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 GAGE12HA6NDE8 117 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 F13A1P00488 732 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 CD247P20963 164 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 FDXRP22570 491 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 LTBRP36941 435 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 MEOX1P50221 254 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 PLCD1P51178 756 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 IL13RA1P78552 427 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 PPP2R5DQ14738 602 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 DPY19L1Q2PZI1 675 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 WDR72Q3MJ13 1102 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 PAN2Q504Q3 1202 aaKnown RBP0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 SEZ6Q53EL9 994 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 ANKRD39Q53RE8 183 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 CEP85LQ5SZL2 805 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 OVOS1Q6IE37 1185 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 GDF7Q7Z4P5 450 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 GPR149Q86SP6 731 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 PPIL4Q8WUA2 492 aaKnown RBP eCLIP0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 ST8SIA2Q92186 375 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 ATG4CQ96DT6 458 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 TRMT2BQ96GJ1 504 aaKnown RBP0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 RPL10LQ96L21 214 aaKnown RBP0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 CAMKK2Q96RR4 588 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 MMP19Q99542 508 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 SRCIN1Q9C0H9 1055 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 SLC39A2Q9NP94 309 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 GMIPQ9P107 970 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 DNMT3BQ9UBC3 853 aaKnown RBP0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 EGFL7Q9UHF1 273 aa0.21□□□□□ -2.38
RNU6-542P-201ENST00000516405 ADAM21Q9UKJ8 722 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms