RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 DGCR2P98153 550 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 SLC6A3Q01959 620 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 ZNF174Q15697 407 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 DGKDQ16760 1214 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 TTC38Q5R3I4 469 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 SLFN12LQ6IEE8 588 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 OR5AN1Q8NGI8 311 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 MAML3Q96JK9 1138 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 KCMF1Q9P0J7 381 aa4.44□□□□□ -1.7
RNU4-49P-201ENST00000516080 UBA6A0AVT1 1052 aaPredicted RBP4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 KRTAP23-1A1A580 65 aa4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 PTPDC1A2A3K4 754 aa4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 GOLGA8BA8MQT2 603 aa4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 H7C1D1 291 aa4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 GLRX3O76003 335 aaKnown RBP4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 FLT3P36888 993 aa4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 RANGAP1P46060 587 aaPredicted RBP4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 ATP2C1P98194 919 aaPredicted RBP4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 PURAQ00577 322 aaKnown RBP4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 TUBA3CQ13748 450 aa4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 IGFL4Q6B9Z1 124 aa4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 TUBA3EQ6PEY2 450 aa4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 UBE2R2Q712K3 238 aaPredicted RBP4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 PARPBPQ9NWS1 579 aa4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 CDK11AQ9UQ88 783 aaPredicted RBP4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 WDR33Q9C0J8 1336 aaKnown RBP4.43□□□□□ -1.7
RNU4-49P-201ENST00000516080 MAFGO15525 162 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 OPA1O60313 960 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 RGS3P49796 1198 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 BCAR1P56945 870 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 DPTQ07507 201 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 ADCY1Q08828 1119 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 CRHR2Q13324 411 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 TCIRG1Q13488 830 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 SAFB2Q14151 953 aaKnown RBP eCLIP4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 EPHA7Q15375 998 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 GAGE13Q4V321 117 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 SPTY2D1Q68D10 685 aaPredicted RBP4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 BMP8AQ7Z5Y6 402 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 TMPRSS6Q8IU80 811 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 KIAA1958Q8N8K9 716 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 RPGRQ92834 1020 aaKnown RBP4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 WDR92Q96MX6 357 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 CLUHP3Q96NS8 147 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 DNAJC2Q99543 621 aaKnown RBP4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 TRIM8Q9BZR9 551 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 SYNPO2Q9UMS6 1093 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 SH3BP1Q9Y3L3 701 aa4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 TNPO3Q9Y5L0 923 aaKnown RBP4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 RBM8AQ9Y5S9 174 aaKnown RBP4.42□□□□□ -1.7
RNU4-49P-201ENST00000516080 C2orf78A6NCI8 922 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 OVOL3O00110 214 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 TRAF5O00463 557 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 DVL2O14641 736 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 DNAJC8O75937 253 aaPredicted RBP4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 PEX11BO96011 259 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 ADH4P08319 380 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 MAKP20794 623 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 BPIFB4P59827 614 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 RRP1BQ14684 758 aaKnown RBP4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 PRAMEF9Q5VWM5 478 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 ZNF662Q6ZS27 426 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 GSPT2Q8IYD1 628 aaKnown RBP4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 ANKRD53Q8N9V6 530 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 ZNF483Q8TF39 744 aaPredicted RBP4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 NKD2Q969F2 451 aaPredicted RBP4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 MIEF2Q96C03 454 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 MRFAP1L1Q96HT8 127 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 DYDC2Q96IM9 177 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 RPL10LQ96L21 214 aaKnown RBP4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 C16orf92Q96LL3 132 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 TUBGCP5Q96RT8 1024 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 CEP72Q9P209 647 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 B4GALT6Q9UBX8 382 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 MAGEL2Q9UJ55 1249 aa4.41□□□□□ -1.7
RNU4-49P-201ENST00000516080 DAPK3O43293 454 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 STAT3P40763 770 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 INHBCP55103 352 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 ANTXR2P58335 489 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 CNGB1Q14028 1251 aaPredicted RBP4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 BMS1Q14692 1282 aaKnown RBP4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 CRB2Q5IJ48 1285 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 PIK3R6Q5UE93 754 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 TIGD7Q6NT04 549 aaPredicted RBP4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 FAM111BQ6SJ93 734 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 GAREM2Q75VX8 874 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 CLEC14AQ86T13 490 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 PLA2G15Q8NCC3 412 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 SREK1Q8WXA9 508 aaKnown RBP4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 CHFRQ96EP1 664 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 GPHA2Q96T91 129 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 TCF25Q9BQ70 676 aa4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 POLR3BQ9NW08 1133 aaPredicted RBP4.4□□□□□ -1.71
RNU4-49P-201ENST00000516080 UBE2QL1A1L167 161 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 CBX4O00257 560 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 RFPL3O75679 317 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 JUNP05412 331 aaKnown RBP4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 VSIG10L2P0DP72 767 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 MAN2A2P49641 1150 aa4.39□□□□□ -1.71
RNU4-49P-201ENST00000516080 SQSTM1Q13501 440 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms