RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 VAV3Q9UKW4 847 aa19.64■□□□□ 0.73
DDX41-217ENST00000515562 FAM50BQ9Y247 325 aa19.64■□□□□ 0.73
DDX41-217ENST00000515562 PCDHB12Q9Y5F1 795 aa19.64■□□□□ 0.73
DDX41-217ENST00000515562 H3BQ06 376 aaPredicted RBP19.63■□□□□ 0.73
DDX41-217ENST00000515562 STBD1O95210 358 aa19.63■□□□□ 0.73
DDX41-217ENST00000515562 KRT2P35908 639 aa19.63■□□□□ 0.73
DDX41-217ENST00000515562 FAM189BP81408 668 aa19.63■□□□□ 0.73
DDX41-217ENST00000515562 ME3Q16798 604 aa19.63■□□□□ 0.73
DDX41-217ENST00000515562 CSPP1Q1MSJ5 1256 aa19.63■□□□□ 0.73
DDX41-217ENST00000515562 SPOUT1Q5T280 376 aaKnown RBP19.63■□□□□ 0.73
DDX41-217ENST00000515562 EP400NLQ6ZTU2 488 aa19.63■□□□□ 0.73
DDX41-217ENST00000515562 IGKV6-21A0A0C4DH24 114 aa19.62■□□□□ 0.73
DDX41-217ENST00000515562 MARCH6O60337 910 aa19.62■□□□□ 0.73
DDX41-217ENST00000515562 CENPBP07199 599 aaPredicted RBP19.62■□□□□ 0.73
DDX41-217ENST00000515562 QARSP47897 775 aaKnown RBP19.62■□□□□ 0.73
DDX41-217ENST00000515562 NEK4P51957 841 aa19.62■□□□□ 0.73
DDX41-217ENST00000515562 HYAL1Q12794 435 aa19.62■□□□□ 0.73
DDX41-217ENST00000515562 CTC1Q2NKJ3 1217 aa19.62■□□□□ 0.73
DDX41-217ENST00000515562 FAM102BQ5T8I3 360 aa19.62■□□□□ 0.73
DDX41-217ENST00000515562 SLFN12Q8IYM2 578 aa19.62■□□□□ 0.73
DDX41-217ENST00000515562 NECAB1Q8N987 351 aa19.62■□□□□ 0.73
DDX41-217ENST00000515562 SPPL3Q8TCT6 385 aa19.62■□□□□ 0.73
DDX41-217ENST00000515562 CEP89Q96ST8 783 aa19.62■□□□□ 0.73
DDX41-217ENST00000515562 GCOM2Q9BZD3 368 aaPredicted RBP19.62■□□□□ 0.73
DDX41-217ENST00000515562 PPME1Q9Y570 386 aa19.62■□□□□ 0.73
DDX41-217ENST00000515562 TMEM150BA6NC51 233 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 GRXCR2A6NFK2 248 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 DDX11L8A8MPP1 907 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 EML1O00423 815 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 CSPG5O95196 566 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 LARGE1O95461 756 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 FGFR1P11362 822 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 FDPSP14324 419 aaKnown RBP19.61■□□□□ 0.73
DDX41-217ENST00000515562 LAG3P18627 525 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 UBE3AQ05086 875 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 DRP2Q13474 957 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 CAMK1Q14012 370 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 ANO5Q75V66 913 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 ZNF410Q86VK4 478 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 POTEDQ86YR6 584 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 NSUN7Q8NE18 718 aaKnown RBP19.61■□□□□ 0.73
DDX41-217ENST00000515562 POF1BQ8WVV4 589 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 ZNF668Q96K58 619 aaPredicted RBP19.61■□□□□ 0.73
DDX41-217ENST00000515562 C1QTNF1Q9BXJ1 281 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 TMEM117Q9H0C3 514 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 DACT1Q9NYF0 836 aa19.61■□□□□ 0.73
DDX41-217ENST00000515562 PLXNA4Q9HCM2 1894 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 DTNBO60941 627 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 MAFO75444 373 aaPredicted RBP19.6■□□□□ 0.73
DDX41-217ENST00000515562 P4HBP07237 508 aaKnown RBP19.6■□□□□ 0.73
DDX41-217ENST00000515562 IL9P15248 144 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 SFPQP23246 707 aaKnown RBP eCLIP19.6■□□□□ 0.73
DDX41-217ENST00000515562 DNAJB1P25685 340 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 NR5A1Q13285 461 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 TRIM29Q14134 588 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 PLA2G4FQ68DD2 849 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 FAM178BQ8IXR5 827 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 EXOC8Q8IYI6 725 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 ABI1Q8IZP0 508 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 LRRC43Q8N309 656 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 SLC7A3Q8WY07 619 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 HAS1Q92839 578 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 TNFRSF25Q93038 417 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 SH2D3AQ9BRG2 576 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 INO80BQ9C086 356 aaPredicted RBP19.6■□□□□ 0.73
DDX41-217ENST00000515562 CYP26B1Q9NR63 512 aa19.6■□□□□ 0.73
DDX41-217ENST00000515562 SUCLA2Q9P2R7 463 aaPredicted RBP19.6■□□□□ 0.73
DDX41-217ENST00000515562 MYO7AQ13402 2215 aa19.59■□□□□ 0.73
DDX41-217ENST00000515562 BAG4O95429 457 aaKnown RBP19.59■□□□□ 0.73
DDX41-217ENST00000515562 EARS2Q5JPH6 523 aaKnown RBP19.59■□□□□ 0.73
DDX41-217ENST00000515562 ECHDC2Q86YB7 292 aa19.59■□□□□ 0.73
DDX41-217ENST00000515562 THNSL1Q8IYQ7 743 aa19.59■□□□□ 0.73
DDX41-217ENST00000515562 COLGALT1Q8NBJ5 622 aa19.59■□□□□ 0.73
DDX41-217ENST00000515562 LXNQ9BS40 222 aa19.59■□□□□ 0.73
DDX41-217ENST00000515562 CHST12Q9NRB3 414 aa19.59■□□□□ 0.73
DDX41-217ENST00000515562 TYW1Q9NV66 732 aaKnown RBP19.59■□□□□ 0.73
DDX41-217ENST00000515562 A0A087WZ62 844 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 A0A0U1RQF3 1178 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 FAM205CA6NFA0 338 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 EOMESO95936 686 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 LTBRP36941 435 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 EPHA7Q15375 998 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 NCAPH2Q6IBW4 605 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 RHPN2Q8IUC4 686 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 C4orf19Q8IY42 314 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 RSPH1Q8WYR4 309 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 CEP170P1Q96L14 293 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 FDXACB1Q9BRP7 624 aaPredicted RBP19.58■□□□□ 0.72
DDX41-217ENST00000515562 CWH43Q9H720 699 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 TLR9Q9NR96 1032 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 PRKAG3Q9UGI9 489 aa19.58■□□□□ 0.72
DDX41-217ENST00000515562 FSD2A1L4K1 749 aa19.57■□□□□ 0.72
DDX41-217ENST00000515562 GAS2O43903 313 aaKnown RBP19.57■□□□□ 0.72
DDX41-217ENST00000515562 JAK2O60674 1132 aa19.57■□□□□ 0.72
DDX41-217ENST00000515562 TBX10O75333 385 aa19.57■□□□□ 0.72
DDX41-217ENST00000515562 FGF18O76093 207 aa19.57■□□□□ 0.72
DDX41-217ENST00000515562 FGFR4P22455 802 aa19.57■□□□□ 0.72
DDX41-217ENST00000515562 IRS1P35568 1242 aa19.57■□□□□ 0.72
DDX41-217ENST00000515562 PPM1AP35813 382 aa19.57■□□□□ 0.72
DDX41-217ENST00000515562 RFC5P40937 340 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms