RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 PLA2G4FQ68DD2 849 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 FAM117BQ6P1L5 589 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 RTN4RL1Q86UN2 441 aaPredicted RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 FAM228AQ86W67 206 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 NPAS4Q8IUM7 802 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 C4orf32Q8N8J7 132 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 MAFAQ8NHW3 353 aaPredicted RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 ERMNQ8TAM6 284 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 INTS4Q96HW7 963 aaKnown RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 POLR3CQ9BUI4 534 aaPredicted RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 INO80BQ9C086 356 aaPredicted RBP14.28□□□□□ -0.12
CLCN3-210ENST00000515420 TMX1Q9H3N1 280 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 ST3GAL5Q9UNP4 418 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 STK24Q9Y6E0 443 aa14.28□□□□□ -0.12
CLCN3-210ENST00000515420 ADGRA3Q8IWK6 1321 aa14.27□□□□□ -0.12
CLCN3-210ENST00000515420 UPP2O95045 317 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 SARSP49591 514 aaKnown RBP14.27□□□□□ -0.13
CLCN3-210ENST00000515420 PDIA5Q14554 519 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 EMC2Q15006 297 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 XKR9Q5GH70 373 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 MCTP1Q6DN14 999 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 SLC24A5Q71RS6 500 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 TCP11Q8WWU5 503 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 NLRP7Q8WX94 980 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 ZNF689Q96CS4 500 aaPredicted RBP14.27□□□□□ -0.13
CLCN3-210ENST00000515420 SCLT1Q96NL6 688 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 PPP1R16BQ96T49 567 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 SH2D3AQ9BRG2 576 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 GCOM2Q9BZD3 368 aaPredicted RBP14.27□□□□□ -0.13
CLCN3-210ENST00000515420 RAB34Q9BZG1 259 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.27□□□□□ -0.13
CLCN3-210ENST00000515420 RGS18Q9NS28 235 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 SUCLA2Q9P2R7 463 aaPredicted RBP14.27□□□□□ -0.13
CLCN3-210ENST00000515420 RWDD3Q9Y3V2 267 aa14.27□□□□□ -0.13
CLCN3-210ENST00000515420 DENND3A2RUS2 1198 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 K7ELQ4 463 aaPredicted RBP14.26□□□□□ -0.13
CLCN3-210ENST00000515420 ASAP2O43150 1006 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 DGAT1O75907 488 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 DGKIO75912 1065 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 SPATA31C1P0DKV0 1188 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 SFPQP23246 707 aaKnown RBP eCLIP14.26□□□□□ -0.13
CLCN3-210ENST00000515420 RPA1P27694 616 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 TECP42680 631 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 PTGDRQ13258 359 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 DRP2Q13474 957 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 ADGRE1Q14246 886 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 DSC3Q14574 896 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 BRAPQ7Z569 592 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 CATSPER3Q86XQ3 398 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 IGSF22Q8N9C0 903 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 PSPC1Q8WXF1 523 aaKnown RBP14.26□□□□□ -0.13
CLCN3-210ENST00000515420 SNX21Q969T3 373 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 CCDC43Q96MW1 224 aaKnown RBP14.26□□□□□ -0.13
CLCN3-210ENST00000515420 ADAM2Q99965 735 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 ELAC1Q9H777 363 aaKnown RBP14.26□□□□□ -0.13
CLCN3-210ENST00000515420 LMCD1Q9NZU5 365 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 DBR1Q9UK59 544 aaKnown RBP14.26□□□□□ -0.13
CLCN3-210ENST00000515420 PCDHB6Q9Y5E3 794 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 COL4A3BPQ9Y5P4 624 aa14.26□□□□□ -0.13
CLCN3-210ENST00000515420 FNDC1Q4ZHG4 1894 aaPredicted RBP14.25□□□□□ -0.13
CLCN3-210ENST00000515420 PRUNE2Q8WUY3 3088 aa14.25□□□□□ -0.13
CLCN3-210ENST00000515420 C9IYK1 514 aa14.25□□□□□ -0.13
CLCN3-210ENST00000515420 MGEA5O60502 916 aa14.25□□□□□ -0.13
CLCN3-210ENST00000515420 RARRES1P49788 294 aa14.25□□□□□ -0.13
CLCN3-210ENST00000515420 MXD4Q14582 209 aaPredicted RBP14.25□□□□□ -0.13
CLCN3-210ENST00000515420 NBR1Q14596 966 aa14.25□□□□□ -0.13
CLCN3-210ENST00000515420 RHPN2Q8IUC4 686 aa14.25□□□□□ -0.13
CLCN3-210ENST00000515420 CMTR2Q8IYT2 770 aaKnown RBP14.25□□□□□ -0.13
CLCN3-210ENST00000515420 FIBCD1Q8N539 461 aa14.25□□□□□ -0.13
CLCN3-210ENST00000515420 ZNF579Q8NAF0 562 aaKnown RBP14.25□□□□□ -0.13
CLCN3-210ENST00000515420 ARNTL2Q8WYA1 636 aa14.25□□□□□ -0.13
CLCN3-210ENST00000515420 NACC1Q96RE7 527 aa14.25□□□□□ -0.13
CLCN3-210ENST00000515420 MTRQ99707 1265 aa14.25□□□□□ -0.13
CLCN3-210ENST00000515420 ATP6V0A4Q9HBG4 840 aa14.25□□□□□ -0.13
CLCN3-210ENST00000515420 CHST12Q9NRB3 414 aa14.25□□□□□ -0.13
CLCN3-210ENST00000515420 A0A087WZ62 844 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 EPOPA6NHQ4 379 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 C5orf67F2Z3F1 127 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 ZBTB39O15060 712 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 GTPBP6O43824 516 aaPredicted RBP14.24□□□□□ -0.13
CLCN3-210ENST00000515420 MED24O75448 989 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 ZSCAN20P17040 1043 aaPredicted RBP14.24□□□□□ -0.13
CLCN3-210ENST00000515420 FAM189BP81408 668 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 ATP2C1P98194 919 aaPredicted RBP14.24□□□□□ -0.13
CLCN3-210ENST00000515420 POU5F1BQ06416 359 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 PCBP1Q15365 356 aaKnown RBP eCLIP14.24□□□□□ -0.13
CLCN3-210ENST00000515420 ARL6IP4Q66PJ3 421 aaKnown RBP14.24□□□□□ -0.13
CLCN3-210ENST00000515420 SRGAP1Q7Z6B7 1085 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 FERMT3Q86UX7 667 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 RSPH1Q8WYR4 309 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 CLP1Q92989 425 aaKnown RBP14.24□□□□□ -0.13
CLCN3-210ENST00000515420 FDXACB1Q9BRP7 624 aaPredicted RBP14.24□□□□□ -0.13
CLCN3-210ENST00000515420 TRAIPQ9BWF2 469 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 IFT122Q9HBG6 1241 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 XPNPEP1Q9NQW7 623 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 TMEM161AQ9NX61 479 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 DACT1Q9NYF0 836 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 LRWD1Q9UFC0 647 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 LRFN2Q9ULH4 789 aa14.24□□□□□ -0.13
CLCN3-210ENST00000515420 PCDHB7Q9Y5E2 793 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms