RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 FGD2Q7Z6J4 655 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 NOP9Q86U38 636 aaKnown RBP4.93□□□□□ -1.62
CAST-242ENST00000515063 SH3TC2Q8TF17 1288 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 DVL3Q92997 716 aaPredicted RBP4.93□□□□□ -1.62
CAST-242ENST00000515063 GBP4Q96PP9 640 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 LMF1Q96S06 567 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 OR10A5Q9H207 317 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 MSL2Q9HCI7 577 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 TMEM260Q9NX78 707 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 WDR7Q9Y4E6 1490 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 WASHC2CQ9Y4E1 1318 aa4.93□□□□□ -1.62
CAST-242ENST00000515063 ABCC1P33527 1531 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 ZMYM4Q5VZL5 1548 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 CCDC144AA2RUR9 1427 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 RFPL3O75679 317 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 HMGCRP04035 888 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 MMEP08473 750 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 FNTBP49356 437 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 HNRNPMP52272 730 aaKnown RBP eCLIP4.92□□□□□ -1.62
CAST-242ENST00000515063 RAC3P60763 192 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 IL13RA1P78552 427 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 NFKB2Q00653 900 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 SQSTM1Q13501 440 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 STILQ15468 1287 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 TCEA2Q15560 299 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 HS1BP3Q53T59 392 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 GPR155Q7Z3F1 870 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 LIMS2Q7Z4I7 341 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 HOMER1Q86YM7 354 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 CHST14Q8NCH0 376 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 ASB15Q8WXK1 588 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 DLG3Q92796 817 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 C8orf49Q96NF6 230 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 C1QTNF3Q9BXJ4 246 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 ZDHHC5Q9C0B5 715 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 SEMA4AQ9H3S1 761 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 PCIF1Q9H4Z3 704 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 ACSS2Q9NR19 701 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 SAMD15Q9P1V8 674 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 MYRFQ9Y2G1 1151 aa4.92□□□□□ -1.62
CAST-242ENST00000515063 PRDM15P57071 1507 aaPredicted RBP4.92□□□□□ -1.62
CAST-242ENST00000515063 PRAG1Q86YV5 1406 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 DEPDC5O75140 1603 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 H7C1D1 291 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 CNOT4O95628 575 aaKnown RBP4.91□□□□□ -1.62
CAST-242ENST00000515063 KCNA6P17658 529 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 MEOX1P50221 254 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 RALBP1Q15311 655 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 ZNF174Q15697 407 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 ZXDCQ2QGD7 858 aaPredicted RBP4.91□□□□□ -1.62
CAST-242ENST00000515063 EFCAB2Q5VUJ9 269 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 CC2D1AQ6P1N0 951 aaPredicted RBP4.91□□□□□ -1.62
CAST-242ENST00000515063 NME9Q86XW9 330 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 GIMAP8Q8ND71 665 aaPredicted RBP4.91□□□□□ -1.62
CAST-242ENST00000515063 SSBP3Q9BWW4 388 aaPredicted RBP4.91□□□□□ -1.62
CAST-242ENST00000515063 DEF6Q9H4E7 631 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 INTS7Q9NVH2 962 aaKnown RBP4.91□□□□□ -1.62
CAST-242ENST00000515063 UCKL1Q9NWZ5 548 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 MAGEC2Q9UBF1 373 aaPredicted RBP4.91□□□□□ -1.62
CAST-242ENST00000515063 TCAF1Q9Y4C2 921 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 KIAA1210Q9ULL0 1709 aa4.91□□□□□ -1.62
CAST-242ENST00000515063 BRD4O60885 1362 aaPredicted RBP4.91□□□□□ -1.62
CAST-242ENST00000515063 RNF17Q9BXT8 1623 aaKnown RBP4.9□□□□□ -1.62
CAST-242ENST00000515063 SMG6Q86US8 1419 aaKnown RBP4.9□□□□□ -1.62
CAST-242ENST00000515063 PLA2R1Q13018 1463 aa4.9□□□□□ -1.62
CAST-242ENST00000515063 CEP152O94986 1710 aa4.9□□□□□ -1.62
CAST-242ENST00000515063 A0A0G2JNJ9 132 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 PRAMEF22A3QJZ6 481 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 M0R2C6 588 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 GPR42O15529 346 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 MAFO75444 373 aaPredicted RBP4.9□□□□□ -1.63
CAST-242ENST00000515063 ASMTLO95671 621 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 MPIG6BO95866 241 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 CYP17A1P05093 508 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 ZNF20P17024 532 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 APEX1P27695 318 aaKnown RBP4.9□□□□□ -1.63
CAST-242ENST00000515063 MC4RP32245 332 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 KCNQ1P51787 676 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 EIF4HQ15056 248 aaKnown RBP4.9□□□□□ -1.63
CAST-242ENST00000515063 SEC23AQ15436 765 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 TAF7LQ5H9L4 462 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 GRAMD4Q6IC98 578 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 ABHD17CQ6PCB6 329 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 RTKN2Q8IZC4 609 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 FOXB1Q99853 325 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 MEGF9Q9H1U4 602 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 Q9UFV3 132 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 VWDEQ8N2E2 1590 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 LRPPRCP42704 1394 aaKnown RBP4.9□□□□□ -1.63
CAST-242ENST00000515063 ABCA9Q8IUA7 1624 aa4.9□□□□□ -1.63
CAST-242ENST00000515063 TET3O43151 1660 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 SPHKAPQ2M3C7 1700 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 A2MP01023 1474 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 TRPM2O94759 1503 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 PATE3B3GLJ2 98 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 C1QTNF3-AMACRE9PGA6 284 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 GOLGA6L22H0YM25 854 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 MAFGO15525 162 aa4.89□□□□□ -1.63
CAST-242ENST00000515063 DNAJC8O75937 253 aaPredicted RBP4.89□□□□□ -1.63
CAST-242ENST00000515063 GLRX3O76003 335 aaKnown RBP4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms