RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 RGL1Q9NZL6 768 aa27.44■■□□□ 1.98
SNF8-213ENST00000514929 WRAP73Q9P2S5 460 aaPredicted RBP27.44■■□□□ 1.98
SNF8-213ENST00000514929 WNT7AO00755 349 aa27.43■■□□□ 1.98
SNF8-213ENST00000514929 RB1P06400 928 aa27.43■■□□□ 1.98
SNF8-213ENST00000514929 DARSP14868 501 aaKnown RBP27.43■■□□□ 1.98
SNF8-213ENST00000514929 NPEPPSP55786 919 aa27.43■■□□□ 1.98
SNF8-213ENST00000514929 CYP4A11Q02928 519 aa27.43■■□□□ 1.98
SNF8-213ENST00000514929 C4orf19Q8IY42 314 aa27.43■■□□□ 1.98
SNF8-213ENST00000514929 IL27Q8NEV9 243 aa27.43■■□□□ 1.98
SNF8-213ENST00000514929 CLP1Q92989 425 aaKnown RBP27.43■■□□□ 1.98
SNF8-213ENST00000514929 CEP170P1Q96L14 293 aa27.43■■□□□ 1.98
SNF8-213ENST00000514929 C11orf84Q9BUA3 381 aaPredicted RBP27.43■■□□□ 1.98
SNF8-213ENST00000514929 ZSWIM4Q9H7M6 989 aa27.43■■□□□ 1.98
SNF8-213ENST00000514929 TTC12Q9H892 705 aaPredicted RBP27.43■■□□□ 1.98
SNF8-213ENST00000514929 SUCLA2Q9P2R7 463 aaPredicted RBP27.43■■□□□ 1.98
SNF8-213ENST00000514929 C9IYK1 514 aa27.42■■□□□ 1.98
SNF8-213ENST00000514929 LINC00271P0C7V0 271 aa27.42■■□□□ 1.98
SNF8-213ENST00000514929 ZSCAN20P17040 1043 aaPredicted RBP27.42■■□□□ 1.98
SNF8-213ENST00000514929 TXKP42681 527 aa27.42■■□□□ 1.98
SNF8-213ENST00000514929 GNL2Q13823 731 aaKnown RBP27.42■■□□□ 1.98
SNF8-213ENST00000514929 CTTNQ14247 550 aaKnown RBP27.42■■□□□ 1.98
SNF8-213ENST00000514929 AAK1Q2M2I8 961 aa27.42■■□□□ 1.98
SNF8-213ENST00000514929 OTUD6AQ7L8S5 288 aa27.42■■□□□ 1.98
SNF8-213ENST00000514929 FBXO18Q8NFZ0 1043 aa27.42■■□□□ 1.98
SNF8-213ENST00000514929 SLC7A3Q8WY07 619 aa27.42■■□□□ 1.98
SNF8-213ENST00000514929 GCOM2Q9BZD3 368 aaPredicted RBP27.42■■□□□ 1.98
SNF8-213ENST00000514929 COG5Q9UP83 839 aa27.42■■□□□ 1.98
SNF8-213ENST00000514929 MRPL42Q9Y6G3 142 aaKnown RBP27.42■■□□□ 1.98
SNF8-213ENST00000514929 C5orf67F2Z3F1 127 aa27.41■■□□□ 1.98
SNF8-213ENST00000514929 YWHABP31946 246 aaKnown RBP27.41■■□□□ 1.98
SNF8-213ENST00000514929 MCM7P33993 719 aa27.41■■□□□ 1.98
SNF8-213ENST00000514929 GATMP50440 423 aa27.41■■□□□ 1.98
SNF8-213ENST00000514929 POLGP54098 1239 aaPredicted RBP27.41■■□□□ 1.98
SNF8-213ENST00000514929 TFF2Q03403 129 aa27.41■■□□□ 1.98
SNF8-213ENST00000514929 DSC3Q14574 896 aa27.41■■□□□ 1.98
SNF8-213ENST00000514929 RHPN2Q8IUC4 686 aa27.41■■□□□ 1.98
SNF8-213ENST00000514929 TPH2Q8IWU9 490 aa27.41■■□□□ 1.98
SNF8-213ENST00000514929 EXOC8Q8IYI6 725 aa27.41■■□□□ 1.98
SNF8-213ENST00000514929 HLA-CQ95604 372 aa27.41■■□□□ 1.98
SNF8-213ENST00000514929 FOXP1Q9H334 677 aaPredicted RBP27.41■■□□□ 1.98
SNF8-213ENST00000514929 PPME1Q9Y570 386 aa27.41■■□□□ 1.98
SNF8-213ENST00000514929 VCANP13611 3396 aa27.4■■□□□ 1.98
SNF8-213ENST00000514929 ZNF579Q8NAF0 562 aaKnown RBP27.4■■□□□ 1.98
SNF8-213ENST00000514929 MTMR9Q96QG7 549 aa27.4■■□□□ 1.98
SNF8-213ENST00000514929 EIF2AK1Q9BQI3 630 aaKnown RBP27.4■■□□□ 1.98
SNF8-213ENST00000514929 ATP6V0A4Q9HBG4 840 aa27.4■■□□□ 1.98
SNF8-213ENST00000514929 A0A087WZ62 844 aa27.39■■□□□ 1.98
SNF8-213ENST00000514929 SLITRK3O94933 977 aa27.39■■□□□ 1.98
SNF8-213ENST00000514929 FGFR4P22455 802 aa27.39■■□□□ 1.98
SNF8-213ENST00000514929 RFC5P40937 340 aa27.39■■□□□ 1.98
SNF8-213ENST00000514929 FAM189BP81408 668 aa27.39■■□□□ 1.98
SNF8-213ENST00000514929 TIGD5Q53EQ6 642 aa27.39■■□□□ 1.98
SNF8-213ENST00000514929 XKR9Q5GH70 373 aa27.39■■□□□ 1.98
SNF8-213ENST00000514929 ZNF410Q86VK4 478 aa27.39■■□□□ 1.98
SNF8-213ENST00000514929 NEK9Q8TD19 979 aa27.39■■□□□ 1.98
SNF8-213ENST00000514929 FDXACB1Q9BRP7 624 aaPredicted RBP27.39■■□□□ 1.98
SNF8-213ENST00000514929 PLVAPQ9BX97 442 aa27.39■■□□□ 1.98
SNF8-213ENST00000514929 TMEM161AQ9NX61 479 aa27.39■■□□□ 1.98
SNF8-213ENST00000514929 CSDE1O75534 798 aaKnown RBP27.38■■□□□ 1.97
SNF8-213ENST00000514929 FAM102BQ5T8I3 360 aa27.38■■□□□ 1.97
SNF8-213ENST00000514929 NLRP4Q96MN2 994 aa27.38■■□□□ 1.97
SNF8-213ENST00000514929 INO80BQ9C086 356 aaPredicted RBP27.38■■□□□ 1.97
SNF8-213ENST00000514929 TMEM60Q9H2L4 133 aa27.38■■□□□ 1.97
SNF8-213ENST00000514929 DHX33Q9H6R0 707 aaKnown RBP27.38■■□□□ 1.97
SNF8-213ENST00000514929 ELAC1Q9H777 363 aaKnown RBP27.38■■□□□ 1.97
SNF8-213ENST00000514929 BMP2KQ9NSY1 1161 aaPredicted RBP27.38■■□□□ 1.97
SNF8-213ENST00000514929 CUL9Q8IWT3 2517 aa27.37■■□□□ 1.97
SNF8-213ENST00000514929 TBKBP1A7MCY6 615 aa27.37■■□□□ 1.97
SNF8-213ENST00000514929 KSR1Q8IVT5 923 aa27.37■■□□□ 1.97
SNF8-213ENST00000514929 LMAN2LQ9H0V9 348 aa27.37■■□□□ 1.97
SNF8-213ENST00000514929 ZBTB39O15060 712 aa27.36■■□□□ 1.97
SNF8-213ENST00000514929 GRM6O15303 877 aa27.36■■□□□ 1.97
SNF8-213ENST00000514929 SFPQP23246 707 aaKnown RBP eCLIP27.36■■□□□ 1.97
SNF8-213ENST00000514929 SPOUT1Q5T280 376 aaKnown RBP27.36■■□□□ 1.97
SNF8-213ENST00000514929 NOSTRINQ8IVI9 506 aa27.36■■□□□ 1.97
SNF8-213ENST00000514929 PSPC1Q8WXF1 523 aaKnown RBP27.36■■□□□ 1.97
SNF8-213ENST00000514929 TMEM143Q96AN5 459 aa27.36■■□□□ 1.97
SNF8-213ENST00000514929 HSD17B14Q9BPX1 270 aa27.36■■□□□ 1.97
SNF8-213ENST00000514929 KIF3AQ9Y496 699 aa27.36■■□□□ 1.97
SNF8-213ENST00000514929 COL4A3BPQ9Y5P4 624 aa27.36■■□□□ 1.97
SNF8-213ENST00000514929 XIRP2A4UGR9 3374 aa27.35■■□□□ 1.97
SNF8-213ENST00000514929 GAS2O43903 313 aaKnown RBP27.35■■□□□ 1.97
SNF8-213ENST00000514929 FGFR1P11362 822 aa27.35■■□□□ 1.97
SNF8-213ENST00000514929 ORC2Q13416 577 aaPredicted RBP27.35■■□□□ 1.97
SNF8-213ENST00000514929 EMC2Q15006 297 aa27.35■■□□□ 1.97
SNF8-213ENST00000514929 ZNF174Q15697 407 aa27.35■■□□□ 1.97
SNF8-213ENST00000514929 TCP11Q8WWU5 503 aa27.35■■□□□ 1.97
SNF8-213ENST00000514929 PRPF31Q8WWY3 499 aaKnown RBP27.35■■□□□ 1.97
SNF8-213ENST00000514929 P2RX5Q93086 422 aa27.35■■□□□ 1.97
SNF8-213ENST00000514929 CCDC43Q96MW1 224 aaKnown RBP27.35■■□□□ 1.97
SNF8-213ENST00000514929 DACT1Q9NYF0 836 aa27.35■■□□□ 1.97
SNF8-213ENST00000514929 NOL7Q9UMY1 257 aaKnown RBP27.35■■□□□ 1.97
SNF8-213ENST00000514929 KIAA1671Q9BY89 1806 aa27.34■■□□□ 1.97
SNF8-213ENST00000514929 POTEMA6NI47 508 aa27.34■■□□□ 1.97
SNF8-213ENST00000514929 HOXA2O43364 376 aa27.34■■□□□ 1.97
SNF8-213ENST00000514929 LYPLA2O95372 231 aa27.34■■□□□ 1.97
SNF8-213ENST00000514929 KCNQ1P51787 676 aa27.34■■□□□ 1.97
SNF8-213ENST00000514929 NAALADL2Q58DX5 795 aa27.34■■□□□ 1.97
SNF8-213ENST00000514929 TTC38Q5R3I4 469 aa27.34■■□□□ 1.97
SNF8-213ENST00000514929 ECHDC2Q86YB7 292 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms