RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ARP10275 920 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 PYGBP11216 843 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 PBX3P40426 434 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 PTH1RQ03431 593 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 CWF19L1Q69YN2 538 aaKnown RBP15.83■□□□□ 0.12
SPCS3-204ENST00000513139 CCDC105Q8IYK2 499 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 RUFY2Q8WXA3 655 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 CCDC136Q96JN2 1154 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 CYP26B1Q9NR63 512 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 DBR1Q9UK59 544 aaKnown RBP15.83■□□□□ 0.12
SPCS3-204ENST00000513139 IRAK3Q9Y616 596 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 TAF6LQ9Y6J9 622 aa15.83■□□□□ 0.12
SPCS3-204ENST00000513139 CARNS1A5YM72 827 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 C22orf31O95567 290 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 CCNE2O96020 404 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 FOSP01100 380 aaPredicted RBP15.82■□□□□ 0.12
SPCS3-204ENST00000513139 CALM1P0DP23 149 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 CALM2P0DP24 149 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 CALM3P0DP25 149 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 ZSCAN20P17040 1043 aaPredicted RBP15.82■□□□□ 0.12
SPCS3-204ENST00000513139 GIT2Q14161 759 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 RARS2Q5T160 578 aaKnown RBP15.82■□□□□ 0.12
SPCS3-204ENST00000513139 ERICH6BQ5W0A0 696 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 CASC1Q6TDU7 716 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 NIPA1Q7RTP0 329 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 ECHDC2Q86YB7 292 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 CCDC60Q8IWA6 550 aaPredicted RBP15.82■□□□□ 0.12
SPCS3-204ENST00000513139 BBXQ8WY36 941 aaPredicted RBP15.82■□□□□ 0.12
SPCS3-204ENST00000513139 RSPH1Q8WYR4 309 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 ZNF302Q9NR11 478 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 EPG5Q9HCE0 2579 aa15.82■□□□□ 0.12
SPCS3-204ENST00000513139 TPRP12270 2363 aaKnown RBP15.82■□□□□ 0.12
SPCS3-204ENST00000513139 CXCL14O95715 111 aa15.81■□□□□ 0.12
SPCS3-204ENST00000513139 VTNP04004 478 aa15.81■□□□□ 0.12
SPCS3-204ENST00000513139 NPR3P17342 541 aa15.81■□□□□ 0.12
SPCS3-204ENST00000513139 ALDH7A1P49419 539 aaKnown RBP15.81■□□□□ 0.12
SPCS3-204ENST00000513139 ANGPT1Q15389 498 aa15.81■□□□□ 0.12
SPCS3-204ENST00000513139 CLLU1OSQ5K130 101 aa15.81■□□□□ 0.12
SPCS3-204ENST00000513139 MIS18BP1Q6P0N0 1132 aa15.81■□□□□ 0.12
SPCS3-204ENST00000513139 CMTR1Q8N1G2 835 aaKnown RBP15.81■□□□□ 0.12
SPCS3-204ENST00000513139 DTWD2Q8NBA8 298 aa15.81■□□□□ 0.12
SPCS3-204ENST00000513139 FLCNQ8NFG4 579 aa15.81■□□□□ 0.12
SPCS3-204ENST00000513139 ACSF2Q96CM8 615 aaPredicted RBP15.81■□□□□ 0.12
SPCS3-204ENST00000513139 TMEM169Q96HH4 297 aa15.81■□□□□ 0.12
SPCS3-204ENST00000513139 MRPL9Q9BYD2 267 aaKnown RBP15.81■□□□□ 0.12
SPCS3-204ENST00000513139 PPP4R2Q9NY27 417 aa15.81■□□□□ 0.12
SPCS3-204ENST00000513139 NCOR2Q9Y618 2525 aa15.81■□□□□ 0.12
SPCS3-204ENST00000513139 A0A0U1RQF3 1178 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 CCDC69A6NI79 296 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 MAGEB2O15479 319 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 PI15O43692 258 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 WEE2P0C1S8 567 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 ATP4AP20648 1035 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 POLGP54098 1239 aaPredicted RBP15.8■□□□□ 0.12
SPCS3-204ENST00000513139 TDGQ13569 410 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 SWSAP1Q6NVH7 229 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 OTOP3Q7RTS5 596 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 HEATR3Q7Z4Q2 680 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 VPS52Q8N1B4 723 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 METTL13Q8N6R0 699 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 C12orf76Q8N812 135 aaPredicted RBP15.8■□□□□ 0.12
SPCS3-204ENST00000513139 TMEM87AQ8NBN3 555 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 TMEM87BQ96K49 555 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 ZBP1Q9H171 429 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 RIC8AQ9NPQ8 531 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 DUSP12Q9UNI6 340 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 MAFBQ9Y5Q3 323 aaPredicted RBP15.8■□□□□ 0.12
SPCS3-204ENST00000513139 DOCK8Q8NF50 2099 aa15.8■□□□□ 0.12
SPCS3-204ENST00000513139 hCG_1642624A0A1W2PR95 340 aa15.79■□□□□ 0.12
SPCS3-204ENST00000513139 DHX15O43143 795 aaKnown RBP15.79■□□□□ 0.12
SPCS3-204ENST00000513139 EIF4BP23588 611 aaKnown RBP15.79■□□□□ 0.12
SPCS3-204ENST00000513139 SREBF1P36956 1147 aa15.79■□□□□ 0.12
SPCS3-204ENST00000513139 LIFRP42702 1097 aa15.79■□□□□ 0.12
SPCS3-204ENST00000513139 BCAR1P56945 870 aa15.79■□□□□ 0.12
SPCS3-204ENST00000513139 NLRP11P59045 1033 aaKnown RBP15.79■□□□□ 0.12
SPCS3-204ENST00000513139 NFXL1Q6ZNB6 911 aa15.79■□□□□ 0.12
SPCS3-204ENST00000513139 ZNF598Q86UK7 904 aaKnown RBP15.79■□□□□ 0.12
SPCS3-204ENST00000513139 PPFIBP1Q86W92 1011 aa15.79■□□□□ 0.12
SPCS3-204ENST00000513139 SLC22A17Q8WUG5 538 aa15.79■□□□□ 0.12
SPCS3-204ENST00000513139 PPP1R16BQ96T49 567 aa15.79■□□□□ 0.12
SPCS3-204ENST00000513139 ADAMTS10Q9H324 1103 aa15.79■□□□□ 0.12
SPCS3-204ENST00000513139 CEP131Q9UPN4 1083 aa15.79■□□□□ 0.12
SPCS3-204ENST00000513139 CACNA1IQ9P0X4 2223 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.78■□□□□ 0.12
SPCS3-204ENST00000513139 SH2B2O14492 632 aaPredicted RBP15.78■□□□□ 0.12
SPCS3-204ENST00000513139 PRC1O43663 620 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 LMNAP02545 664 aaKnown RBP15.78■□□□□ 0.12
SPCS3-204ENST00000513139 CTSAP10619 480 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 EPCAMP16422 314 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 CHMLP26374 656 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 TMOD1P28289 359 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 MCM5P33992 734 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 CA8P35219 290 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 AP3B2Q13367 1082 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 PPP1R18Q6NYC8 613 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 CCDC149Q6ZUS6 474 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 TMTC3Q6ZXV5 915 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 GPR149Q86SP6 731 aa15.78■□□□□ 0.12
SPCS3-204ENST00000513139 DDX53Q86TM3 631 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms