RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 RNPEPQ9H4A4 650 aa12.02□□□□□ -0.49
PFDN1-204ENST00000512707 DHX33Q9H6R0 707 aaKnown RBP12.02□□□□□ -0.49
PFDN1-204ENST00000512707 PAK6Q9NQU5 681 aaPredicted RBP12.02□□□□□ -0.49
PFDN1-204ENST00000512707 MAN1B1Q9UKM7 699 aa12.02□□□□□ -0.49
PFDN1-204ENST00000512707 NPHP3-ACAD11A0A0J9YXS1 232 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 C17orf102A2RUQ5 167 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 MYADML2A6NDP7 307 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 HAS3O00219 553 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 MYCP01106 439 aaPredicted RBP12.01□□□□□ -0.49
PFDN1-204ENST00000512707 SMIM10L2AP0DMW4 78 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 SMIM10L2BP0DMW5 78 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 SCP2P22307 547 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 ACLYP53396 1101 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 RTP1P59025 263 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 NLRP12P59046 1061 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 COASYQ13057 564 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 FAM26FQ5R3K3 315 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 ODR4Q5SWX8 454 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 ZNF658Q5TYW1 1059 aaPredicted RBP12.01□□□□□ -0.49
PFDN1-204ENST00000512707 IER5Q5VY09 327 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 LHX8Q68G74 356 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 CXCL17Q6UXB2 119 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 MAEAQ7L5Y9 396 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 METTL13Q8N6R0 699 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 ARMC5Q96C12 935 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 ZNF333Q96JL9 665 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 MAP7D2Q96T17 732 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 SEZ6LQ9BYH1 1024 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 MRPL44Q9H9J2 332 aaKnown RBP12.01□□□□□ -0.49
PFDN1-204ENST00000512707 SUGCTQ9HAC7 445 aa12.01□□□□□ -0.49
PFDN1-204ENST00000512707 BRCA2P51587 3418 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 FRMD3A2A2Y4 597 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 DNM1LO00429 736 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 RPLP2P05387 115 aaKnown RBP12□□□□□ -0.49
PFDN1-204ENST00000512707 PLS3P13797 630 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 KLRC1P26715 233 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 ZNF131P52739 623 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 CDC42EP1Q00587 391 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 ALCAMQ13740 583 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 MORC3Q14149 939 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 TFDP1Q14186 410 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 MXD4Q14582 209 aaPredicted RBP12□□□□□ -0.49
PFDN1-204ENST00000512707 FAM47CQ5HY64 1035 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 CT47A1Q5JQC4 288 aaPredicted RBP12□□□□□ -0.49
PFDN1-204ENST00000512707 L1TD1Q5T7N2 865 aaKnown RBP12□□□□□ -0.49
PFDN1-204ENST00000512707 NFRKBQ6P4R8 1299 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 SFR1Q86XK3 245 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 FAM178BQ8IXR5 827 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 PSPC1Q8WXF1 523 aaKnown RBP12□□□□□ -0.49
PFDN1-204ENST00000512707 KAT2BQ92831 832 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 TMEM106CQ9BVX2 250 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 POLR3FQ9H1D9 316 aaPredicted RBP12□□□□□ -0.49
PFDN1-204ENST00000512707 OLFML3Q9NRN5 406 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 PHLPP2Q6ZVD8 1323 aa12□□□□□ -0.49
PFDN1-204ENST00000512707 ZBTB42B2RXF5 422 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 PSMA7O14818 248 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 ASAP2O43150 1006 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 KLRC4O43908 158 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 C22orf31O95567 290 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 TFRCP02786 760 aaKnown RBP11.99□□□□□ -0.49
PFDN1-204ENST00000512707 GJB1P08034 283 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 MAPTP10636 758 aaKnown RBP11.99□□□□□ -0.49
PFDN1-204ENST00000512707 IRX5P78411 483 aaPredicted RBP11.99□□□□□ -0.49
PFDN1-204ENST00000512707 PTPN11Q06124 597 aaPredicted RBP11.99□□□□□ -0.49
PFDN1-204ENST00000512707 MTFR1Q15390 333 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 NBPF20Q3BBV1 942 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 ISM2Q6H9L7 571 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 CCSAPQ6IQ19 270 aaPredicted RBP11.99□□□□□ -0.49
PFDN1-204ENST00000512707 EFCAB12Q6NXP0 572 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 MTHFD1LQ6UB35 978 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 ZNF710Q8N1W2 664 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 LMBR1Q8WVP7 490 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 PDLIM7Q9NR12 457 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 SETD4Q9NVD3 440 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 PHF24Q9UPV7 400 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 NOD1Q9Y239 953 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 PCDHB13Q9Y5F0 798 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 ARID2Q68CP9 1835 aa11.99□□□□□ -0.49
PFDN1-204ENST00000512707 CEP290O15078 2479 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 UBE4BO95155 1302 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 IGKV6-21A0A0C4DH24 114 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 A0A0U1RQG5 324 aaPredicted RBP11.98□□□□□ -0.49
PFDN1-204ENST00000512707 A0A1W2PQ45 241 aaPredicted RBP11.98□□□□□ -0.49
PFDN1-204ENST00000512707 A0A1W2PQY0 241 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 CCDC169A6NNP5 214 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 RSPH10B2B2RC85 870 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 K7ENM7 598 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 GCNT3O95395 438 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 RSPH10BP0C881 870 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 NAMPTP43490 491 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 PEX3P56589 373 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 TPM4P67936 248 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 MAPK7Q13164 816 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 ITGA7Q13683 1181 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 DPCR1Q3MIW9 517 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 ANO6Q4KMQ2 910 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 HABP4Q5JVS0 413 aaKnown RBP11.98□□□□□ -0.49
PFDN1-204ENST00000512707 TAF2Q6P1X5 1199 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 RSPH3Q86UC2 560 aa11.98□□□□□ -0.49
PFDN1-204ENST00000512707 SESTD1Q86VW0 696 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms