RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 EIF2AK4Q9P2K8 1649 aaKnown RBP5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 TULP4Q9NRJ4 1543 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 MBD5Q9P267 1494 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 NALCNQ8IZF0 1738 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 XRN1Q8IZH2 1706 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 DHX57Q6P158 1386 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 ARVCFO00192 962 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 KRIT1O00522 736 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 WNT9AO14904 365 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 MATN3O15232 486 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 TADA3O75528 432 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 NAT1P18440 290 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 IL13P35225 146 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 GUCY1A3Q02108 690 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 IDI1Q13907 227 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 DALRD3Q5D0E6 543 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 CYP4F22Q6NT55 531 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 FGD2Q7Z6J4 655 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 MTDHQ86UE4 582 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 TRIM48Q8IWZ4 208 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 NINJ1Q92982 152 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 MAGEB10Q96LZ2 347 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 ORAI2Q96SN7 254 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 SYT3Q9BQG1 590 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 ALG1Q9BT22 464 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 SSBP3Q9BWW4 388 aaPredicted RBP5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 CLDND1Q9NY35 253 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 PPARGC1AQ9UBK2 798 aaKnown RBP5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 FTSJ1Q9UET6 329 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 SRRDQ9UH36 339 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 PLAAQ9Y263 795 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 PCDHA9Q9Y5H5 950 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 CCDC141Q6ZP82 1450 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 NRAPQ86VF7 1730 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 RIMS2Q9UQ26 1411 aa5.06□□□□□ -1.6
TOPBP1-208ENST00000511439 LRPPRCP42704 1394 aaKnown RBP5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 TCRBV5S2A0A599 114 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 TCRBV16S1A1N1A0A5B0 115 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 B4GALT3O60512 393 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 RASGRP1O95267 797 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 SOD2P04179 222 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 SDSP20132 328 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 GRK2P25098 689 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 GRK3P35626 688 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 FSTL1Q12841 308 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 PAK1Q13153 545 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 TEPPQ6URK8 271 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 YTHDC1Q96MU7 727 aaKnown RBP5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 SMOC1Q9H4F8 434 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 BARX1Q9HBU1 254 aaPredicted RBP5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 INTS7Q9NVH2 962 aaKnown RBP5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 STK32BQ9NY57 414 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 HSPBP1Q9NZL4 362 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 MYOTQ9UBF9 498 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 NUB1Q9Y5A7 615 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 CFAP65Q6ZU64 1925 aaKnown RBP5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 PTPRUQ92729 1446 aa5.05□□□□□ -1.6
TOPBP1-208ENST00000511439 CCNB3Q8WWL7 1395 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 NPEPPSL1A6NEC2 478 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 FAM47E-STBD1D6RA91 191 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 DNAJC8O75937 253 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 CLSTN1O94985 981 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 GYS2P54840 703 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 C21orf62-AS1Q17RA5 79 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 PKN3Q6P5Z2 889 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 ARHGEF18Q6ZSZ5 1173 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 CIR1Q86X95 450 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 NIM1KQ8IY84 436 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 C16orf71Q8IYS4 520 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 FAM177A1Q8N128 213 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 KLHL36Q8N4N3 616 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 ARRDC4Q8NCT1 418 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 PCDH19Q8TAB3 1148 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 JAM3Q9BX67 310 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 IPPKQ9H8X2 491 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 MAGEC2Q9UBF1 373 aaPredicted RBP5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 CROTQ9UKG9 612 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 TSC22D4Q9Y3Q8 395 aa5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 RRBP1Q9P2E9 1410 aaKnown RBP5.04□□□□□ -1.6
TOPBP1-208ENST00000511439 ARHGEF28Q8N1W1 1705 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 LRRIQ1Q96JM4 1722 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 SPATA31A5Q5VU36 1347 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 SPATA31A7Q8IWB4 1347 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 PLSCR1O15162 318 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 AKAP8O43823 692 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 APPP05067 770 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 CANXP27824 592 aaKnown RBP5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 POLD1P28340 1107 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 EPHB4P54760 987 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 PPP2CBP62714 309 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 PPP2CAP67775 309 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 LIMS2Q7Z4I7 341 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 TTLL11Q8NHH1 800 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 ZSWIM3Q96MP5 696 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 SLKQ9H2G2 1235 aaPredicted RBP5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 SEMA4AQ9H3S1 761 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 PPP4R1LQ9P1A2 415 aa5.03□□□□□ -1.6
TOPBP1-208ENST00000511439 ST6GALNAC2Q9UJ37 374 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms