RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 LACTBP83111 547 aaPredicted RBP9.89□□□□□ -0.83
USP53-206ENST00000510737 CD83Q01151 205 aa9.89□□□□□ -0.83
USP53-206ENST00000510737 EIF4HQ15056 248 aaKnown RBP9.89□□□□□ -0.83
USP53-206ENST00000510737 CRY1Q16526 586 aa9.89□□□□□ -0.83
USP53-206ENST00000510737 KANK2Q63ZY3 851 aa9.89□□□□□ -0.83
USP53-206ENST00000510737 MAMDC4Q6UXC1 1216 aa9.89□□□□□ -0.83
USP53-206ENST00000510737 USP51Q70EK9 711 aa9.89□□□□□ -0.83
USP53-206ENST00000510737 SCYL1Q96KG9 808 aa9.89□□□□□ -0.83
USP53-206ENST00000510737 OR14A2Q96R54 314 aa9.89□□□□□ -0.83
USP53-206ENST00000510737 DHRS4Q9BTZ2 278 aa9.89□□□□□ -0.83
USP53-206ENST00000510737 MRPS23Q9Y3D9 190 aaKnown RBP9.89□□□□□ -0.83
USP53-206ENST00000510737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.88□□□□□ -0.83
USP53-206ENST00000510737 ARHGAP6O43182 974 aa9.88□□□□□ -0.83
USP53-206ENST00000510737 MMEP08473 750 aa9.88□□□□□ -0.83
USP53-206ENST00000510737 HERVK_113P62684 666 aa9.88□□□□□ -0.83
USP53-206ENST00000510737 TRIM68Q6AZZ1 485 aa9.88□□□□□ -0.83
USP53-206ENST00000510737 CXXC5Q7LFL8 322 aaKnown RBP9.88□□□□□ -0.83
USP53-206ENST00000510737 NOSTRINQ8IVI9 506 aa9.88□□□□□ -0.83
USP53-206ENST00000510737 CISD2Q8N5K1 135 aaKnown RBP9.88□□□□□ -0.83
USP53-206ENST00000510737 SLC52A2Q9HAB3 445 aa9.88□□□□□ -0.83
USP53-206ENST00000510737 KIDINS220Q9ULH0 1771 aa9.88□□□□□ -0.83
USP53-206ENST00000510737 OVOL3O00110 214 aa9.87□□□□□ -0.83
USP53-206ENST00000510737 U2SURPO15042 1029 aaKnown RBP9.87□□□□□ -0.83
USP53-206ENST00000510737 PCOLCEQ15113 449 aa9.87□□□□□ -0.83
USP53-206ENST00000510737 NAALADL2Q58DX5 795 aa9.87□□□□□ -0.83
USP53-206ENST00000510737 POLNQ7Z5Q5 900 aa9.87□□□□□ -0.83
USP53-206ENST00000510737 ZC3H7AQ8IWR0 971 aaKnown RBP9.87□□□□□ -0.83
USP53-206ENST00000510737 KIF14Q15058 1648 aa9.86□□□□□ -0.83
USP53-206ENST00000510737 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.86□□□□□ -0.83
USP53-206ENST00000510737 RASSF10A6NK89 507 aa9.86□□□□□ -0.83
USP53-206ENST00000510737 NPHP4O75161 1426 aaPredicted RBP9.86□□□□□ -0.83
USP53-206ENST00000510737 THEMISQ8N1K5 641 aaPredicted RBP9.86□□□□□ -0.83
USP53-206ENST00000510737 ZNF808Q8N4W9 903 aaPredicted RBP9.86□□□□□ -0.83
USP53-206ENST00000510737 BTBD2Q9BX70 525 aa9.86□□□□□ -0.83
USP53-206ENST00000510737 C12orf65Q9H3J6 166 aaKnown RBP9.86□□□□□ -0.83
USP53-206ENST00000510737 CDK11AQ9UQ88 783 aaPredicted RBP9.86□□□□□ -0.83
USP53-206ENST00000510737 COQ6Q9Y2Z9 468 aa9.86□□□□□ -0.83
USP53-206ENST00000510737 ABCC1P33527 1531 aa9.86□□□□□ -0.83
USP53-206ENST00000510737 FAM135BQ49AJ0 1406 aa9.85□□□□□ -0.83
USP53-206ENST00000510737 FAM221BA6H8Z2 402 aa9.85□□□□□ -0.83
USP53-206ENST00000510737 ECE1P42892 770 aa9.85□□□□□ -0.83
USP53-206ENST00000510737 FOXL1Q12952 345 aa9.85□□□□□ -0.83
USP53-206ENST00000510737 FILIP1Q7Z7B0 1213 aa9.85□□□□□ -0.83
USP53-206ENST00000510737 GPR135Q8IZ08 494 aa9.85□□□□□ -0.83
USP53-206ENST00000510737 ASB15Q8WXK1 588 aa9.85□□□□□ -0.83
USP53-206ENST00000510737 MED14O60244 1454 aa9.85□□□□□ -0.83
USP53-206ENST00000510737 KDM2BQ8NHM5 1336 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 ITSN2Q9NZM3 1697 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 SCDO00767 359 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 NARSO43776 548 aaKnown RBP9.84□□□□□ -0.83
USP53-206ENST00000510737 RASGRP1O95267 797 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 SERINC3Q13530 473 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 RASA3Q14644 834 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 TMEM200BQ69YZ2 307 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 EP400NLQ6ZTU2 488 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 USP30Q70CQ3 517 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 GSTCDQ8NEC7 633 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 IL17DQ8TAD2 202 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 SLC7A14Q8TBB6 771 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 OR10A5Q9H207 317 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 SLITRK6Q9H5Y7 841 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 FBXO10Q9UK96 956 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 PLXNC1O60486 1568 aa9.84□□□□□ -0.83
USP53-206ENST00000510737 DEPDC5O75140 1603 aa9.83□□□□□ -0.84
USP53-206ENST00000510737 C1SP09871 688 aa9.83□□□□□ -0.84
USP53-206ENST00000510737 MRE11P49959 708 aa9.83□□□□□ -0.84
USP53-206ENST00000510737 ZC3H6P61129 1189 aaKnown RBP9.83□□□□□ -0.84
USP53-206ENST00000510737 HGFACQ04756 655 aa9.83□□□□□ -0.84
USP53-206ENST00000510737 MOGSQ13724 837 aa9.83□□□□□ -0.84
USP53-206ENST00000510737 FAM47CQ5HY64 1035 aa9.83□□□□□ -0.84
USP53-206ENST00000510737 CRB2Q5IJ48 1285 aa9.83□□□□□ -0.84
USP53-206ENST00000510737 OTOP2Q7RTS6 562 aa9.83□□□□□ -0.84
USP53-206ENST00000510737 SCLYQ96I15 445 aa9.83□□□□□ -0.84
USP53-206ENST00000510737 IPO9Q96P70 1041 aaKnown RBP9.83□□□□□ -0.84
USP53-206ENST00000510737 NDOR1Q9UHB4 597 aa9.83□□□□□ -0.84
USP53-206ENST00000510737 PUF60Q9UHX1 559 aaKnown RBP9.83□□□□□ -0.84
USP53-206ENST00000510737 IQGAP1P46940 1657 aa9.83□□□□□ -0.84
USP53-206ENST00000510737 SPAG9O60271 1321 aaKnown RBP9.82□□□□□ -0.84
USP53-206ENST00000510737 NAT1P18440 290 aa9.82□□□□□ -0.84
USP53-206ENST00000510737 HNRNPMP52272 730 aaKnown RBP eCLIP9.82□□□□□ -0.84
USP53-206ENST00000510737 NBPF6Q5VWK0 638 aa9.82□□□□□ -0.84
USP53-206ENST00000510737 NBPF4Q96M43 638 aa9.82□□□□□ -0.84
USP53-206ENST00000510737 AGO3Q9H9G7 860 aaKnown RBP9.82□□□□□ -0.84
USP53-206ENST00000510737 SIRPGQ9P1W8 387 aa9.82□□□□□ -0.84
USP53-206ENST00000510737 HECAQ9UBI9 543 aaPredicted RBP9.82□□□□□ -0.84
USP53-206ENST00000510737 TNRQ92752 1358 aa9.82□□□□□ -0.84
USP53-206ENST00000510737 XIRP1Q702N8 1843 aaKnown RBP9.82□□□□□ -0.84
USP53-206ENST00000510737 TROQ12816 1431 aaPredicted RBP9.82□□□□□ -0.84
USP53-206ENST00000510737 A0A0G2JNJ9 132 aa9.81□□□□□ -0.84
USP53-206ENST00000510737 GSTA4O15217 222 aa9.81□□□□□ -0.84
USP53-206ENST00000510737 KCNA6P17658 529 aa9.81□□□□□ -0.84
USP53-206ENST00000510737 STAT5BP51692 787 aa9.81□□□□□ -0.84
USP53-206ENST00000510737 PTH1RQ03431 593 aa9.81□□□□□ -0.84
USP53-206ENST00000510737 FHL2Q14192 279 aa9.81□□□□□ -0.84
USP53-206ENST00000510737 LONRF2Q1L5Z9 754 aa9.81□□□□□ -0.84
USP53-206ENST00000510737 OVCH1Q7RTY7 1134 aa9.81□□□□□ -0.84
USP53-206ENST00000510737 BCL6BQ8N143 479 aaPredicted RBP9.81□□□□□ -0.84
USP53-206ENST00000510737 OR14K1Q8NGZ2 314 aa9.81□□□□□ -0.84
USP53-206ENST00000510737 Q9UFV3 132 aa9.81□□□□□ -0.84
USP53-206ENST00000510737 PRAMEF22A3QJZ6 481 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms