RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 HIBADHP31937 336 aaKnown RBP7.6□□□□□ -1.19
NUP54-209ENST00000510569 DGCR2P98153 550 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 HHEXQ03014 270 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 ABHD18Q0P651 414 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 EPHA7Q15375 998 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 DGKDQ16760 1214 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 TTC38Q5R3I4 469 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 D2HGDHQ8N465 521 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 KIAA1958Q8N8K9 716 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 MPHOSPH9Q99550 1183 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 ZNF703Q9H7S9 590 aaPredicted RBP7.6□□□□□ -1.19
NUP54-209ENST00000510569 KCMF1Q9P0J7 381 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 B4GALT6Q9UBX8 382 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 DENND2AQ9ULE3 1009 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 KRTAP23-1A1A580 65 aa7.59□□□□□ -1.19
NUP54-209ENST00000510569 H7C1D1 291 aa7.59□□□□□ -1.19
NUP54-209ENST00000510569 RFPL3O75679 317 aa7.59□□□□□ -1.19
NUP54-209ENST00000510569 ANTXR2P58335 489 aa7.59□□□□□ -1.19
NUP54-209ENST00000510569 ADAM8P78325 824 aa7.59□□□□□ -1.19
NUP54-209ENST00000510569 LSM12Q3MHD2 195 aaKnown RBP7.59□□□□□ -1.19
NUP54-209ENST00000510569 NME9Q86XW9 330 aa7.59□□□□□ -1.19
NUP54-209ENST00000510569 SH3TC2Q8TF17 1288 aa7.59□□□□□ -1.19
NUP54-209ENST00000510569 CSRNP2Q9H175 543 aa7.59□□□□□ -1.19
NUP54-209ENST00000510569 KANSL2Q9H9L4 492 aa7.59□□□□□ -1.19
NUP54-209ENST00000510569 TMEM260Q9NX78 707 aa7.59□□□□□ -1.19
NUP54-209ENST00000510569 GIT1Q9Y2X7 761 aa7.59□□□□□ -1.19
NUP54-209ENST00000510569 A0A1W2PRX2 142 aa7.58□□□□□ -1.2
NUP54-209ENST00000510569 C2orf78A6NCI8 922 aa7.58□□□□□ -1.2
NUP54-209ENST00000510569 CAPN14A8MX76 684 aa7.58□□□□□ -1.2
NUP54-209ENST00000510569 CYP27B1O15528 508 aa7.58□□□□□ -1.2
NUP54-209ENST00000510569 ATP2C1P98194 919 aaPredicted RBP7.58□□□□□ -1.2
NUP54-209ENST00000510569 PIK3R6Q5UE93 754 aa7.58□□□□□ -1.2
NUP54-209ENST00000510569 CREB3L3Q68CJ9 461 aa7.58□□□□□ -1.2
NUP54-209ENST00000510569 SPTY2D1Q68D10 685 aaPredicted RBP7.58□□□□□ -1.2
NUP54-209ENST00000510569 BMP8AQ7Z5Y6 402 aa7.58□□□□□ -1.2
NUP54-209ENST00000510569 AMER2Q8N7J2 671 aa7.58□□□□□ -1.2
NUP54-209ENST00000510569 TMEM176AQ96HP8 235 aa7.58□□□□□ -1.2
NUP54-209ENST00000510569 MRFAP1L1Q96HT8 127 aa7.58□□□□□ -1.2
NUP54-209ENST00000510569 HECAQ9UBI9 543 aaPredicted RBP7.58□□□□□ -1.2
NUP54-209ENST00000510569 PPP1R12AO14974 1030 aaPredicted RBP7.57□□□□□ -1.2
NUP54-209ENST00000510569 SDSP20132 328 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 PTX3P26022 381 aaPredicted RBP7.57□□□□□ -1.2
NUP54-209ENST00000510569 STAT3P40763 770 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 RANGAP1P46060 587 aaPredicted RBP7.57□□□□□ -1.2
NUP54-209ENST00000510569 MYBPC3Q14896 1274 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 ZNF174Q15697 407 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 GAGE13Q4V321 117 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 ESRP1Q6NXG1 681 aaKnown RBP7.57□□□□□ -1.2
NUP54-209ENST00000510569 SGMS1Q86VZ5 419 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 GCDHQ92947 438 aaPredicted RBP7.57□□□□□ -1.2
NUP54-209ENST00000510569 PLEKHG4BQ96PX9 1271 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 GPHA2Q96T91 129 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 ORAI3Q9BRQ5 295 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 KRTAP17-1Q9BYP8 105 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 SLITRK6Q9H5Y7 841 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 CEP72Q9P209 647 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 MAGEL2Q9UJ55 1249 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 SH3BP1Q9Y3L3 701 aa7.57□□□□□ -1.2
NUP54-209ENST00000510569 FLT3P36888 993 aa7.56□□□□□ -1.2
NUP54-209ENST00000510569 BCAR1P56945 870 aa7.56□□□□□ -1.2
NUP54-209ENST00000510569 TCIRG1Q13488 830 aa7.56□□□□□ -1.2
NUP54-209ENST00000510569 FHL2Q14192 279 aa7.56□□□□□ -1.2
NUP54-209ENST00000510569 CLEC14AQ86T13 490 aa7.56□□□□□ -1.2
NUP54-209ENST00000510569 PITHD1Q9GZP4 211 aaPredicted RBP7.56□□□□□ -1.2
NUP54-209ENST00000510569 INTS7Q9NVH2 962 aaKnown RBP7.56□□□□□ -1.2
NUP54-209ENST00000510569 POLR3BQ9NW08 1133 aaPredicted RBP7.56□□□□□ -1.2
NUP54-209ENST00000510569 JMJD7P0C870 316 aa7.55□□□□□ -1.2
NUP54-209ENST00000510569 MCM7P33993 719 aa7.55□□□□□ -1.2
NUP54-209ENST00000510569 BPIFB4P59827 614 aa7.55□□□□□ -1.2
NUP54-209ENST00000510569 PRAMEF9Q5VWM5 478 aa7.55□□□□□ -1.2
NUP54-209ENST00000510569 CDCA2Q69YH5 1023 aaPredicted RBP7.55□□□□□ -1.2
NUP54-209ENST00000510569 UBE2R2Q712K3 238 aaPredicted RBP7.55□□□□□ -1.2
NUP54-209ENST00000510569 KANSL1Q7Z3B3 1105 aa7.55□□□□□ -1.2
NUP54-209ENST00000510569 TMPRSS6Q8IU80 811 aa7.55□□□□□ -1.2
NUP54-209ENST00000510569 THEMISQ8N1K5 641 aaPredicted RBP7.55□□□□□ -1.2
NUP54-209ENST00000510569 ANKRD35Q8N283 1001 aa7.55□□□□□ -1.2
NUP54-209ENST00000510569 SYNPOQ8N3V7 929 aa7.55□□□□□ -1.2
NUP54-209ENST00000510569 DYDC2Q96IM9 177 aa7.55□□□□□ -1.2
NUP54-209ENST00000510569 SPO11Q9Y5K1 396 aa7.55□□□□□ -1.2
NUP54-209ENST00000510569 RBM8AQ9Y5S9 174 aaKnown RBP7.55□□□□□ -1.2
NUP54-209ENST00000510569 ADCY1Q08828 1119 aa7.54□□□□□ -1.2
NUP54-209ENST00000510569 PABPC4Q13310 644 aaKnown RBP eCLIP7.54□□□□□ -1.2
NUP54-209ENST00000510569 TUBA3CQ13748 450 aa7.54□□□□□ -1.2
NUP54-209ENST00000510569 ACAP1Q15027 740 aa7.54□□□□□ -1.2
NUP54-209ENST00000510569 FNDC7Q5VTL7 733 aa7.54□□□□□ -1.2
NUP54-209ENST00000510569 TUBA3EQ6PEY2 450 aa7.54□□□□□ -1.2
NUP54-209ENST00000510569 ANKRD53Q8N9V6 530 aa7.54□□□□□ -1.2
NUP54-209ENST00000510569 RPGRQ92834 1020 aaKnown RBP7.54□□□□□ -1.2
NUP54-209ENST00000510569 WDR92Q96MX6 357 aa7.54□□□□□ -1.2
NUP54-209ENST00000510569 TUBGCP5Q96RT8 1024 aa7.54□□□□□ -1.2
NUP54-209ENST00000510569 ELF4Q99607 663 aaPredicted RBP7.54□□□□□ -1.2
NUP54-209ENST00000510569 MENTQ9BUN1 341 aa7.54□□□□□ -1.2
NUP54-209ENST00000510569 ZSWIM4Q9H7M6 989 aa7.54□□□□□ -1.2
NUP54-209ENST00000510569 MAGEC2Q9UBF1 373 aaPredicted RBP7.54□□□□□ -1.2
NUP54-209ENST00000510569 ASMTLO95671 621 aa7.53□□□□□ -1.2
NUP54-209ENST00000510569 SLC9A1P19634 815 aa7.53□□□□□ -1.2
NUP54-209ENST00000510569 RRP1BQ14684 758 aaKnown RBP7.53□□□□□ -1.2
NUP54-209ENST00000510569 CFAP100Q494V2 611 aa7.53□□□□□ -1.2
NUP54-209ENST00000510569 GAREM2Q75VX8 874 aa7.53□□□□□ -1.2
NUP54-209ENST00000510569 PLA2G15Q8NCC3 412 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms