RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.52■□□□□ 0.725e-7■■■□□ 16
CCHCR1-228ENST00000509552 TAF1DQ9H5J8 278 aaPredicted RBP19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 DAAM1Q9Y4D1 1078 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 SMCHD1A6NHR9 2005 aa19.52■□□□□ 0.72
CCHCR1-228ENST00000509552 YDJCA8MPS7 323 aa19.52■□□□□ 0.71
CCHCR1-228ENST00000509552 DRAP1Q14919 205 aaPredicted RBP19.52■□□□□ 0.71
CCHCR1-228ENST00000509552 TTMPQ5BVD1 217 aa19.52■□□□□ 0.71
CCHCR1-228ENST00000509552 SAMD1Q6SPF0 538 aaPredicted RBP19.52■□□□□ 0.71
CCHCR1-228ENST00000509552 SYCP3Q8IZU3 236 aa19.52■□□□□ 0.71
CCHCR1-228ENST00000509552 IQCKQ8N0W5 287 aa19.52■□□□□ 0.71
CCHCR1-228ENST00000509552 METTL13Q8N6R0 699 aa19.52■□□□□ 0.71
CCHCR1-228ENST00000509552 ARL8AQ96BM9 186 aa19.52■□□□□ 0.71
CCHCR1-228ENST00000509552 ISCUQ9H1K1 167 aa19.52■□□□□ 0.71
CCHCR1-228ENST00000509552 VCPKMTQ9H867 229 aa19.52■□□□□ 0.71
CCHCR1-228ENST00000509552 DMAC2Q9NW81 257 aa19.52■□□□□ 0.71
CCHCR1-228ENST00000509552 CCDC188H7C350 402 aa19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 PLA2G6O60733 806 aa19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 ARP10275 920 aa19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 GUCY2CP25092 1073 aa19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 GALCP54803 685 aa19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 LXNQ9BS40 222 aa19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 LCMT1Q9UIC8 334 aa19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 IPO5O00410 1097 aaKnown RBP19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 CUL1Q13616 776 aa19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 HLTFQ14527 1009 aaKnown RBP eCLIP19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 DLGAP5Q15398 846 aa19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 ZYXQ15942 572 aaKnown RBP19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 PTPROQ16827 1216 aa19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 SLC30A5Q8TAD4 765 aa19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 NEK9Q8TD19 979 aa19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 INTS2Q9H0H0 1204 aaKnown RBP19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 WRAP73Q9P2S5 460 aaPredicted RBP19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 ZNF70Q9UC06 446 aaPredicted RBP19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 NOC2LQ9Y3T9 749 aaKnown RBP19.51■□□□□ 0.71
CCHCR1-228ENST00000509552 KRIT1O00522 736 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 EXOC3O60645 756 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 MYL7Q01449 175 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 GLYCTKQ8IVS8 523 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 LNX1Q8TBB1 728 aaPredicted RBP19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 ZFP91Q96JP5 570 aaPredicted RBP19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 RIT2Q99578 217 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 APEX2Q9UBZ4 518 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 FEM1BQ9UK73 627 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 AMFRQ9UKV5 643 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 STXBP5LQ9Y2K9 1186 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 GNGT1P63211 74 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 CBWD6Q4V339 395 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 CBWD3Q5JTY5 395 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 CBWD5Q5RIA9 395 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 RSBN1LQ6PCB5 846 aaPredicted RBP19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 LDHDQ86WU2 507 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 SLC9A9Q8IVB4 645 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 CD302Q8IX05 232 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 CTNNBL1Q8WYA6 563 aaPredicted RBP19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 AP1M1Q9BXS5 423 aa19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 FEZ2Q9UHY8 353 aaPredicted RBP19.5■□□□□ 0.71
CCHCR1-228ENST00000509552 HIP1RO75146 1068 aa19.49■□□□□ 0.71
CCHCR1-228ENST00000509552 KRT14P02533 472 aa19.49■□□□□ 0.71
CCHCR1-228ENST00000509552 TMEM253P0C7T8 217 aa19.49■□□□□ 0.71
CCHCR1-228ENST00000509552 TRIM49P0CI25 452 aa19.49■□□□□ 0.71
CCHCR1-228ENST00000509552 TRIM49CP0CI26 452 aa19.49■□□□□ 0.71
CCHCR1-228ENST00000509552 SKOR1P84550 965 aa19.49■□□□□ 0.71
CCHCR1-228ENST00000509552 MYBPC2Q14324 1141 aa19.49■□□□□ 0.71
CCHCR1-228ENST00000509552 NT5DC3Q86UY8 548 aa19.49■□□□□ 0.71
CCHCR1-228ENST00000509552 RASGEF1CQ8N431 466 aa19.49■□□□□ 0.71
CCHCR1-228ENST00000509552 OGFOD1Q8N543 542 aa19.49■□□□□ 0.71
CCHCR1-228ENST00000509552 BANK1Q8NDB2 785 aa19.49■□□□□ 0.71
CCHCR1-228ENST00000509552 MXRA8Q9BRK3 442 aa19.49■□□□□ 0.71
CCHCR1-228ENST00000509552 SART1O43290 800 aaKnown RBP19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 KRT13P13646 458 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 RFX1P22670 979 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 ERVK-9P63128 1117 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 BFSP1Q12934 665 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 TNIP1Q15025 636 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 DNAJC21Q5F1R6 531 aaKnown RBP19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 B3GNT9Q6UX72 402 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 RFFLQ8WZ73 363 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 ZNF233A6NK53 670 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 EIF3HO15372 352 aaKnown RBP eCLIP19.48■□□□□ 0.716e-6■■■■□ 25.8
CCHCR1-228ENST00000509552 ZBTB48P10074 688 aaPredicted RBP19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 TNFAIP3P21580 790 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 HSPA9P38646 679 aaKnown RBP19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 TRADDQ15628 312 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 C10orf67Q8IYJ2 551 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 CCDC26Q8TAB7 109 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 SLC35G2Q8TBE7 412 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 HES6Q96HZ4 224 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 RASSF4Q9H2L5 321 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 NCANO14594 1321 aa19.48■□□□□ 0.71
CCHCR1-228ENST00000509552 K7ENM7 598 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 MIER3Q7Z3K6 550 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 MAATS1Q7Z4T9 603 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 PIK3R5Q8WYR1 880 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 SLITRK6Q9H5Y7 841 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 LARSQ9P2J5 1176 aaKnown RBP19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 DDX39AO00148 427 aaKnown RBP19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 CETN1Q12798 172 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 ALCAMQ13740 583 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 KCTD16Q68DU8 428 aa19.47■□□□□ 0.71
CCHCR1-228ENST00000509552 PADI6Q6TGC4 694 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms