RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 PCDHB6Q9Y5E3 794 aa18.05■□□□□ 0.48
PDLIM5-212ENST00000509333 OR52Z1P0C646 297 aa18.04■□□□□ 0.48
PDLIM5-212ENST00000509333 DARSP14868 501 aaKnown RBP18.04■□□□□ 0.48
PDLIM5-212ENST00000509333 IGFBP4P22692 258 aa18.04■□□□□ 0.48
PDLIM5-212ENST00000509333 PTGDRQ13258 359 aa18.04■□□□□ 0.48
PDLIM5-212ENST00000509333 PDIA5Q14554 519 aa18.04■□□□□ 0.48
PDLIM5-212ENST00000509333 MCTP1Q6DN14 999 aa18.04■□□□□ 0.48
PDLIM5-212ENST00000509333 KSR1Q8IVT5 923 aa18.04■□□□□ 0.48
PDLIM5-212ENST00000509333 NEK9Q8TD19 979 aa18.04■□□□□ 0.48
PDLIM5-212ENST00000509333 YME1L1Q96TA2 773 aa18.04■□□□□ 0.48
PDLIM5-212ENST00000509333 RC3H2Q9HBD1 1191 aaKnown RBP18.04■□□□□ 0.48
PDLIM5-212ENST00000509333 SIP14410 1827 aa18.04■□□□□ 0.48
PDLIM5-212ENST00000509333 A0A087WZ62 844 aa18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 POTEMA6NI47 508 aa18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 C9IYK1 514 aa18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 H3BQV1 296 aa18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 CSDE1O75534 798 aaKnown RBP18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 RFC5P40937 340 aa18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 SLC24A5Q71RS6 500 aa18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 SLC17A8Q8NDX2 589 aa18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 PRPF31Q8WWY3 499 aaKnown RBP18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 TMEM143Q96AN5 459 aa18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 FDXACB1Q9BRP7 624 aaPredicted RBP18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 C17orf80Q9BSJ5 609 aa18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 POLR3CQ9BUI4 534 aaPredicted RBP18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 GCOM2Q9BZD3 368 aaPredicted RBP18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 MTCH2Q9Y6C9 303 aa18.03■□□□□ 0.48
PDLIM5-212ENST00000509333 PRRC2BQ5JSZ5 2229 aaKnown RBP18.02■□□□□ 0.48
PDLIM5-212ENST00000509333 MED24O75448 989 aa18.02■□□□□ 0.48
PDLIM5-212ENST00000509333 SARSP49591 514 aaKnown RBP18.02■□□□□ 0.48
PDLIM5-212ENST00000509333 GRB10Q13322 594 aa18.02■□□□□ 0.48
PDLIM5-212ENST00000509333 IL17AQ16552 155 aa18.02■□□□□ 0.48
PDLIM5-212ENST00000509333 RHPN2Q8IUC4 686 aa18.02■□□□□ 0.48
PDLIM5-212ENST00000509333 NPAS4Q8IUM7 802 aa18.02■□□□□ 0.48
PDLIM5-212ENST00000509333 PIGOQ8TEQ8 1089 aa18.02■□□□□ 0.48
PDLIM5-212ENST00000509333 SLC7A3Q8WY07 619 aa18.02■□□□□ 0.48
PDLIM5-212ENST00000509333 TUFT1Q9NNX1 390 aa18.02■□□□□ 0.48
PDLIM5-212ENST00000509333 C1orf112Q9NSG2 853 aa18.02■□□□□ 0.48
PDLIM5-212ENST00000509333 ASAP2O43150 1006 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 LINC00271P0C7V0 271 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 STAG3L1P0CL83 205 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 FGFR4P22455 802 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 RPA1P27694 616 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 FXR2P51116 673 aaKnown RBP eCLIP18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 POLGP54098 1239 aaPredicted RBP18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 EPC2Q52LR7 807 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 RILPL1Q5EBL4 403 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 ZNF410Q86VK4 478 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 TMEM192Q8IY95 271 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 FIBCD1Q8N539 461 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 NLRP7Q8WX94 980 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 NACC1Q96RE7 527 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 IFT122Q9HBG6 1241 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 XPNPEP1Q9NQW7 623 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 MTUS1Q9ULD2 1270 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 PCDHB7Q9Y5E2 793 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 A0A0C4DFX4 3053 aa18.01■□□□□ 0.47
PDLIM5-212ENST00000509333 DENND3A2RUS2 1198 aa18■□□□□ 0.47
PDLIM5-212ENST00000509333 ZSCAN20P17040 1043 aaPredicted RBP18■□□□□ 0.47
PDLIM5-212ENST00000509333 ARL2P36404 184 aa18■□□□□ 0.47
PDLIM5-212ENST00000509333 RARRES1P49788 294 aa18■□□□□ 0.47
PDLIM5-212ENST00000509333 LAMTOR4Q0VGL1 99 aa18■□□□□ 0.47
PDLIM5-212ENST00000509333 CCDC85BQ15834 202 aaPredicted RBP18■□□□□ 0.47
PDLIM5-212ENST00000509333 FAM102BQ5T8I3 360 aa18■□□□□ 0.47
PDLIM5-212ENST00000509333 TCP11Q8WWU5 503 aa18■□□□□ 0.47
PDLIM5-212ENST00000509333 SAMD11Q96NU1 681 aa18■□□□□ 0.47
PDLIM5-212ENST00000509333 INO80BQ9C086 356 aaPredicted RBP18■□□□□ 0.47
PDLIM5-212ENST00000509333 LMCD1Q9NZU5 365 aa18■□□□□ 0.47
PDLIM5-212ENST00000509333 COL4A3BPQ9Y5P4 624 aa18■□□□□ 0.47
PDLIM5-212ENST00000509333 TRANK1O15050 2925 aa18■□□□□ 0.47
PDLIM5-212ENST00000509333 LAD1O00515 517 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 GAS2O43903 313 aaKnown RBP17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 DGAT1O75907 488 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 SRGAP2CP0DJJ0 459 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 BMPR1AP36894 532 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 BTG3Q14201 252 aaPredicted RBP17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 EMC2Q15006 297 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 ECM1Q16610 540 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 FERMT3Q86UX7 667 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 IGSF22Q8N9C0 903 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 ERMNQ8TAM6 284 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 PPM1EQ8WY54 764 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 CLP1Q92989 425 aaKnown RBP17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 INTS4Q96HW7 963 aaKnown RBP17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 ELAC1Q9H777 363 aaKnown RBP17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 CHST12Q9NRB3 414 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 LRWD1Q9UFC0 647 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 DBR1Q9UK59 544 aaKnown RBP17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 LRFN2Q9ULH4 789 aa17.99■□□□□ 0.47
PDLIM5-212ENST00000509333 H3BNC9 293 aa17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 MUTP22033 750 aa17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 PRPHP41219 470 aa17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 GATMP50440 423 aa17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 CMTR2Q8IYT2 770 aaKnown RBP17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 FBXO22Q8NEZ5 403 aa17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 PSPC1Q8WXF1 523 aaKnown RBP17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 SNX21Q969T3 373 aa17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 SCLT1Q96NL6 688 aa17.98■□□□□ 0.47
PDLIM5-212ENST00000509333 MTRQ99707 1265 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms