RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 ADAMTS10Q9H324 1103 aa20.89■□□□□ 0.93
UBE3D-207ENST00000509102 ZSWIM4Q9H7M6 989 aa20.89■□□□□ 0.93
UBE3D-207ENST00000509102 CYP26B1Q9NR63 512 aa20.89■□□□□ 0.93
UBE3D-207ENST00000509102 MAFO75444 373 aaPredicted RBP20.88■□□□□ 0.93
UBE3D-207ENST00000509102 BMPR1AP36894 532 aa20.88■□□□□ 0.93
UBE3D-207ENST00000509102 POLGP54098 1239 aaPredicted RBP20.88■□□□□ 0.93
UBE3D-207ENST00000509102 TIGD5Q53EQ6 642 aa20.88■□□□□ 0.93
UBE3D-207ENST00000509102 ANO5Q75V66 913 aa20.88■□□□□ 0.93
UBE3D-207ENST00000509102 C4orf19Q8IY42 314 aa20.88■□□□□ 0.93
UBE3D-207ENST00000509102 NEK9Q8TD19 979 aa20.88■□□□□ 0.93
UBE3D-207ENST00000509102 HLA-CQ95604 372 aa20.88■□□□□ 0.93
UBE3D-207ENST00000509102 CCDC43Q96MW1 224 aaKnown RBP20.88■□□□□ 0.93
UBE3D-207ENST00000509102 PLVAPQ9BX97 442 aa20.88■□□□□ 0.93
UBE3D-207ENST00000509102 FOXP1Q9H334 677 aaPredicted RBP20.88■□□□□ 0.93
UBE3D-207ENST00000509102 TTC12Q9H892 705 aaPredicted RBP20.88■□□□□ 0.93
UBE3D-207ENST00000509102 RC3H2Q9HBD1 1191 aaKnown RBP20.88■□□□□ 0.93
UBE3D-207ENST00000509102 SUCLA2Q9P2R7 463 aaPredicted RBP20.88■□□□□ 0.93
UBE3D-207ENST00000509102 IGKV6-21A0A0C4DH24 114 aa20.87■□□□□ 0.93
UBE3D-207ENST00000509102 TMEM150BA6NC51 233 aa20.87■□□□□ 0.93
UBE3D-207ENST00000509102 C5orf67F2Z3F1 127 aa20.87■□□□□ 0.93
UBE3D-207ENST00000509102 DARSP14868 501 aaKnown RBP20.87■□□□□ 0.93
UBE3D-207ENST00000509102 ATP2B1P20020 1258 aa20.87■□□□□ 0.93
UBE3D-207ENST00000509102 YWHABP31946 246 aaKnown RBP20.87■□□□□ 0.93
UBE3D-207ENST00000509102 RFC5P40937 340 aa20.87■□□□□ 0.93
UBE3D-207ENST00000509102 TXKP42681 527 aa20.87■□□□□ 0.93
UBE3D-207ENST00000509102 PLA2G4FQ68DD2 849 aa20.87■□□□□ 0.93
UBE3D-207ENST00000509102 ZNF410Q86VK4 478 aa20.87■□□□□ 0.93
UBE3D-207ENST00000509102 TPH2Q8IWU9 490 aa20.87■□□□□ 0.93
UBE3D-207ENST00000509102 FBXO18Q8NFZ0 1043 aa20.87■□□□□ 0.93
UBE3D-207ENST00000509102 CLP1Q92989 425 aaKnown RBP20.87■□□□□ 0.93
UBE3D-207ENST00000509102 SH2D3AQ9BRG2 576 aa20.87■□□□□ 0.93
UBE3D-207ENST00000509102 ATP6V0A4Q9HBG4 840 aa20.87■□□□□ 0.93
UBE3D-207ENST00000509102 CUL9Q8IWT3 2517 aa20.86■□□□□ 0.93
UBE3D-207ENST00000509102 RALGAPA2Q2PPJ7 1873 aa20.86■□□□□ 0.93
UBE3D-207ENST00000509102 HOXA2O43364 376 aa20.86■□□□□ 0.93
UBE3D-207ENST00000509102 GAS2O43903 313 aaKnown RBP20.86■□□□□ 0.93
UBE3D-207ENST00000509102 MGEA5O60502 916 aa20.86■□□□□ 0.93
UBE3D-207ENST00000509102 STBD1O95210 358 aa20.86■□□□□ 0.93
UBE3D-207ENST00000509102 SFPQP23246 707 aaKnown RBP eCLIP20.86■□□□□ 0.93
UBE3D-207ENST00000509102 CYP4A11Q02928 519 aa20.86■□□□□ 0.93
UBE3D-207ENST00000509102 ORC2Q13416 577 aaPredicted RBP20.86■□□□□ 0.93
UBE3D-207ENST00000509102 PAN2Q504Q3 1202 aaKnown RBP20.86■□□□□ 0.93
UBE3D-207ENST00000509102 SPOUT1Q5T280 376 aaKnown RBP20.86■□□□□ 0.93
UBE3D-207ENST00000509102 RHPN2Q8IUC4 686 aa20.86■□□□□ 0.93
UBE3D-207ENST00000509102 DYDC2Q96IM9 177 aa20.86■□□□□ 0.93
UBE3D-207ENST00000509102 ZNF668Q96K58 619 aaPredicted RBP20.86■□□□□ 0.93
UBE3D-207ENST00000509102 LMAN2LQ9H0V9 348 aa20.86■□□□□ 0.93
UBE3D-207ENST00000509102 ELAC1Q9H777 363 aaKnown RBP20.86■□□□□ 0.93
UBE3D-207ENST00000509102 TMEM161AQ9NX61 479 aa20.86■□□□□ 0.93
UBE3D-207ENST00000509102 DACT1Q9NYF0 836 aa20.86■□□□□ 0.93
UBE3D-207ENST00000509102 NOL7Q9UMY1 257 aaKnown RBP20.86■□□□□ 0.93
UBE3D-207ENST00000509102 C9IYK1 514 aa20.85■□□□□ 0.93
UBE3D-207ENST00000509102 MCM7P33993 719 aa20.85■□□□□ 0.93
UBE3D-207ENST00000509102 SPIRE1Q08AE8 756 aa20.85■□□□□ 0.93
UBE3D-207ENST00000509102 NAALADL2Q58DX5 795 aa20.85■□□□□ 0.93
UBE3D-207ENST00000509102 XKR9Q5GH70 373 aa20.85■□□□□ 0.93
UBE3D-207ENST00000509102 ABI1Q8IZP0 508 aa20.85■□□□□ 0.93
UBE3D-207ENST00000509102 CRIPAKQ8N1N5 446 aa20.85■□□□□ 0.93
UBE3D-207ENST00000509102 TCP11Q8WWU5 503 aa20.85■□□□□ 0.93
UBE3D-207ENST00000509102 EIF2AK1Q9BQI3 630 aaKnown RBP20.85■□□□□ 0.93
UBE3D-207ENST00000509102 AAASQ9NRG9 546 aa20.85■□□□□ 0.93
UBE3D-207ENST00000509102 RGL1Q9NZL6 768 aa20.85■□□□□ 0.93
UBE3D-207ENST00000509102 NLRC5Q86WI3 1866 aa20.84■□□□□ 0.93
UBE3D-207ENST00000509102 MCM2P49736 904 aa20.84■□□□□ 0.93
UBE3D-207ENST00000509102 NPEPPSP55786 919 aa20.84■□□□□ 0.93
UBE3D-207ENST00000509102 DRP2Q13474 957 aa20.84■□□□□ 0.93
UBE3D-207ENST00000509102 CTTNQ14247 550 aaKnown RBP20.84■□□□□ 0.93
UBE3D-207ENST00000509102 NOSTRINQ8IVI9 506 aa20.84■□□□□ 0.93
UBE3D-207ENST00000509102 PSPC1Q8WXF1 523 aaKnown RBP20.84■□□□□ 0.93
UBE3D-207ENST00000509102 P2RX5Q93086 422 aa20.84■□□□□ 0.93
UBE3D-207ENST00000509102 NLRP4Q96MN2 994 aa20.84■□□□□ 0.93
UBE3D-207ENST00000509102 CEP89Q96ST8 783 aa20.84■□□□□ 0.93
UBE3D-207ENST00000509102 MRPL42Q9Y6G3 142 aaKnown RBP20.84■□□□□ 0.93
UBE3D-207ENST00000509102 A0A087WZ62 844 aa20.83■□□□□ 0.93
UBE3D-207ENST00000509102 TBKBP1A7MCY6 615 aa20.83■□□□□ 0.93
UBE3D-207ENST00000509102 TRAPPC10P48553 1259 aa20.83■□□□□ 0.93
UBE3D-207ENST00000509102 DSC3Q14574 896 aa20.83■□□□□ 0.93
UBE3D-207ENST00000509102 ERMNQ8TAM6 284 aa20.83■□□□□ 0.93
UBE3D-207ENST00000509102 MTMR9Q96QG7 549 aa20.83■□□□□ 0.93
UBE3D-207ENST00000509102 FDXACB1Q9BRP7 624 aaPredicted RBP20.83■□□□□ 0.93
UBE3D-207ENST00000509102 CHST12Q9NRB3 414 aa20.83■□□□□ 0.93
UBE3D-207ENST00000509102 WRAP73Q9P2S5 460 aaPredicted RBP20.83■□□□□ 0.93
UBE3D-207ENST00000509102 PCDHB12Q9Y5F1 795 aa20.83■□□□□ 0.93
UBE3D-207ENST00000509102 COL4A3BPQ9Y5P4 624 aa20.83■□□□□ 0.93
UBE3D-207ENST00000509102 SLITRK3O94933 977 aa20.82■□□□□ 0.92
UBE3D-207ENST00000509102 FAM189BP81408 668 aa20.82■□□□□ 0.92
UBE3D-207ENST00000509102 PPP2R3CQ969Q6 453 aa20.82■□□□□ 0.92
UBE3D-207ENST00000509102 MTRQ99707 1265 aa20.82■□□□□ 0.92
UBE3D-207ENST00000509102 NSUN3Q9H649 340 aaKnown RBP20.82■□□□□ 0.92
UBE3D-207ENST00000509102 DHX33Q9H6R0 707 aaKnown RBP20.82■□□□□ 0.92
UBE3D-207ENST00000509102 ASAP2O43150 1006 aa20.81■□□□□ 0.92
UBE3D-207ENST00000509102 LYPLA2O95372 231 aa20.81■□□□□ 0.92
UBE3D-207ENST00000509102 OR52Z1P0C646 297 aa20.81■□□□□ 0.92
UBE3D-207ENST00000509102 SKIP12755 728 aa20.81■□□□□ 0.92
UBE3D-207ENST00000509102 TFF2Q03403 129 aa20.81■□□□□ 0.92
UBE3D-207ENST00000509102 EMC2Q15006 297 aa20.81■□□□□ 0.92
UBE3D-207ENST00000509102 CSPP1Q1MSJ5 1256 aa20.81■□□□□ 0.92
UBE3D-207ENST00000509102 TTC38Q5R3I4 469 aa20.81■□□□□ 0.92
UBE3D-207ENST00000509102 CATSPER4Q7RTX7 472 aa20.81■□□□□ 0.92
UBE3D-207ENST00000509102 RNF169Q8NCN4 708 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms