RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 MEOX1P50221 254 aa9.85□□□□□ -0.83
CHD1-205ENST00000508756 SESN3P58005 492 aa9.85□□□□□ -0.83
CHD1-205ENST00000508756 TBR1Q16650 682 aa9.85□□□□□ -0.83
CHD1-205ENST00000508756 TBC1D10BQ4KMP7 808 aaPredicted RBP9.85□□□□□ -0.83
CHD1-205ENST00000508756 ARHGEF18Q6ZSZ5 1173 aa9.85□□□□□ -0.83
CHD1-205ENST00000508756 WDR66Q8TBY9 1149 aa9.85□□□□□ -0.83
CHD1-205ENST00000508756 PTPN18Q99952 460 aa9.85□□□□□ -0.83
CHD1-205ENST00000508756 ANO3Q9BYT9 981 aa9.85□□□□□ -0.83
CHD1-205ENST00000508756 PITHD1Q9GZP4 211 aaPredicted RBP9.85□□□□□ -0.83
CHD1-205ENST00000508756 VTA1Q9NP79 307 aa9.85□□□□□ -0.83
CHD1-205ENST00000508756 TOPORSQ9NS56 1045 aaPredicted RBP9.85□□□□□ -0.83
CHD1-205ENST00000508756 PPP2R3BQ9Y5P8 575 aa9.85□□□□□ -0.83
CHD1-205ENST00000508756 ZNF536O15090 1300 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 GPR39O43194 453 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 PCDH8O95206 1070 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 CLEC2LP0C7M8 214 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 PPP2CBP62714 309 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 PPP2CAP67775 309 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 RNF151Q2KHN1 245 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 ZMAT1Q5H9K5 638 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 LCE4AQ5TA78 99 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 AGBL4Q5VU57 503 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 DDX42Q86XP3 938 aaKnown RBP eCLIP9.84□□□□□ -0.83
CHD1-205ENST00000508756 DYDC2Q96IM9 177 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 BDH2Q9BUT1 245 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 DENND2AQ9ULE3 1009 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 FAM184BQ9ULE4 1060 aa9.84□□□□□ -0.83
CHD1-205ENST00000508756 A0A0A6YYJ9 748 aa9.83□□□□□ -0.84
CHD1-205ENST00000508756 PRSS38A1L453 326 aa9.83□□□□□ -0.84
CHD1-205ENST00000508756 OPHN1O60890 802 aa9.83□□□□□ -0.84
CHD1-205ENST00000508756 PLATP00750 562 aa9.83□□□□□ -0.84
CHD1-205ENST00000508756 PDCD1Q15116 288 aa9.83□□□□□ -0.84
CHD1-205ENST00000508756 IQSEC1Q6DN90 963 aa9.83□□□□□ -0.84
CHD1-205ENST00000508756 BMP8AQ7Z5Y6 402 aa9.83□□□□□ -0.84
CHD1-205ENST00000508756 COG1Q8WTW3 980 aa9.83□□□□□ -0.84
CHD1-205ENST00000508756 JADE2Q9NQC1 790 aa9.83□□□□□ -0.84
CHD1-205ENST00000508756 POLR3BQ9NW08 1133 aaPredicted RBP9.83□□□□□ -0.84
CHD1-205ENST00000508756 MYPNQ86TC9 1320 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 ST20-MTHFSA0A0A6YYL1 179 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 EPHB4P54760 987 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 MANFP55145 182 aaKnown RBP9.82□□□□□ -0.84
CHD1-205ENST00000508756 ADAM15Q13444 863 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 SURF1Q15526 300 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 ZNF568Q3ZCX4 644 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 LILRA6Q6PI73 481 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 NOL10Q9BSC4 688 aaKnown RBP9.82□□□□□ -0.84
CHD1-205ENST00000508756 HAPLN2Q9GZV7 340 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 OR10A2Q9H208 303 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 PPP4R1LQ9P1A2 415 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 DNAI1Q9UI46 699 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 MCM8Q9UJA3 840 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 ATP8A1Q9Y2Q0 1164 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 NR2E1Q9Y466 385 aa9.82□□□□□ -0.84
CHD1-205ENST00000508756 AMPD3Q01432 767 aa9.81□□□□□ -0.84
CHD1-205ENST00000508756 CCDC62Q6P9F0 684 aa9.81□□□□□ -0.84
CHD1-205ENST00000508756 SPATS2Q86XZ4 545 aaKnown RBP9.81□□□□□ -0.84
CHD1-205ENST00000508756 CMIPQ8IY22 773 aa9.81□□□□□ -0.84
CHD1-205ENST00000508756 NKD2Q969F2 451 aaPredicted RBP9.81□□□□□ -0.84
CHD1-205ENST00000508756 RELTQ969Z4 430 aa9.81□□□□□ -0.84
CHD1-205ENST00000508756 MEGF9Q9H1U4 602 aa9.81□□□□□ -0.84
CHD1-205ENST00000508756 ARHGAP6O43182 974 aa9.8□□□□□ -0.84
CHD1-205ENST00000508756 PRKD3O94806 890 aa9.8□□□□□ -0.84
CHD1-205ENST00000508756 PFKMP08237 780 aa9.8□□□□□ -0.84
CHD1-205ENST00000508756 KLHDC10Q6PID8 442 aa9.8□□□□□ -0.84
CHD1-205ENST00000508756 USP30Q70CQ3 517 aa9.8□□□□□ -0.84
CHD1-205ENST00000508756 LIMS2Q7Z4I7 341 aa9.8□□□□□ -0.84
CHD1-205ENST00000508756 OR14K1Q8NGZ2 314 aa9.8□□□□□ -0.84
CHD1-205ENST00000508756 CXorf38Q8TB03 319 aa9.8□□□□□ -0.84
CHD1-205ENST00000508756 LRRC37BQ96QE4 947 aa9.8□□□□□ -0.84
CHD1-205ENST00000508756 PRDM12Q9H4Q4 367 aa9.8□□□□□ -0.84
CHD1-205ENST00000508756 A0A0A6YYK5 440 aaPredicted RBP9.79□□□□□ -0.84
CHD1-205ENST00000508756 CELA3BP08861 270 aa9.79□□□□□ -0.84
CHD1-205ENST00000508756 RNF219Q5W0B1 726 aaPredicted RBP9.79□□□□□ -0.84
CHD1-205ENST00000508756 NEIL1Q96FI4 390 aaPredicted RBP9.79□□□□□ -0.84
CHD1-205ENST00000508756 WDR92Q96MX6 357 aa9.79□□□□□ -0.84
CHD1-205ENST00000508756 LMF1Q96S06 567 aa9.79□□□□□ -0.84
CHD1-205ENST00000508756 SOX7Q9BT81 388 aa9.79□□□□□ -0.84
CHD1-205ENST00000508756 TMPRSS11EQ9UL52 423 aa9.79□□□□□ -0.84
CHD1-205ENST00000508756 USP18Q9UMW8 372 aa9.79□□□□□ -0.84
CHD1-205ENST00000508756 VWA7Q9Y334 891 aa9.79□□□□□ -0.84
CHD1-205ENST00000508756 PCDHB6Q9Y5E3 794 aa9.79□□□□□ -0.84
CHD1-205ENST00000508756 MATN2O00339 956 aa9.78□□□□□ -0.84
CHD1-205ENST00000508756 FOXD2O60548 495 aaPredicted RBP9.78□□□□□ -0.84
CHD1-205ENST00000508756 HNRNPLP14866 589 aaKnown RBP eCLIP9.78□□□□□ -0.84
CHD1-205ENST00000508756 CDKN1CP49918 316 aaPredicted RBP9.78□□□□□ -0.84
CHD1-205ENST00000508756 NFYCQ13952 458 aa9.78□□□□□ -0.84
CHD1-205ENST00000508756 CT83Q5H943 113 aa9.78□□□□□ -0.84
CHD1-205ENST00000508756 SLFN13Q68D06 897 aa9.78□□□□□ -0.84
CHD1-205ENST00000508756 CTDP1Q9Y5B0 961 aaPredicted RBP9.78□□□□□ -0.84
CHD1-205ENST00000508756 COL4A3BPQ9Y5P4 624 aa9.78□□□□□ -0.84
CHD1-205ENST00000508756 PHLDB1Q86UU1 1377 aa9.77□□□□□ -0.84
CHD1-205ENST00000508756 ANKRD62A6NC57 917 aa9.77□□□□□ -0.85
CHD1-205ENST00000508756 NPEPPSL1A6NEC2 478 aa9.77□□□□□ -0.85
CHD1-205ENST00000508756 MAFGO15525 162 aa9.77□□□□□ -0.85
CHD1-205ENST00000508756 ITGB3P05106 788 aa9.77□□□□□ -0.85
CHD1-205ENST00000508756 RAC3P60763 192 aa9.77□□□□□ -0.85
CHD1-205ENST00000508756 PITRM1Q5JRX3 1037 aa9.77□□□□□ -0.85
CHD1-205ENST00000508756 LYSMD2Q8IV50 215 aa9.77□□□□□ -0.85
CHD1-205ENST00000508756 CFHR4Q92496 578 aa9.77□□□□□ -0.85
CHD1-205ENST00000508756 HIST1H2AHQ96KK5 128 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms