RNA–Protein interactions for RNA: ENST00000508659.5

CLDND1-219, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 681 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-219ENST00000508659 GCOM2Q9BZD3 368 aaPredicted RBP18.91■□□□□ 0.62
CLDND1-219ENST00000508659 TMX1Q9H3N1 280 aa18.91■□□□□ 0.62
CLDND1-219ENST00000508659 ATP6V0A4Q9HBG4 840 aa18.91■□□□□ 0.62
CLDND1-219ENST00000508659 ANKEF1Q9NU02 776 aa18.91■□□□□ 0.62
CLDND1-219ENST00000508659 FOXD4L1Q9NU39 408 aa18.91■□□□□ 0.62
CLDND1-219ENST00000508659 LRWD1Q9UFC0 647 aa18.91■□□□□ 0.62
CLDND1-219ENST00000508659 COL4A6Q14031 1691 aa18.91■□□□□ 0.62
CLDND1-219ENST00000508659 ZBTB39O15060 712 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 MED24O75448 989 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 DGAT1O75907 488 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 SPATA31C1P0DKV0 1188 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 DARSP14868 501 aaKnown RBP18.9■□□□□ 0.62
CLDND1-219ENST00000508659 IBSPP21815 317 aaPredicted RBP18.9■□□□□ 0.62
CLDND1-219ENST00000508659 SFPQP23246 707 aaKnown RBP eCLIP18.9■□□□□ 0.62
CLDND1-219ENST00000508659 PRPHP41219 470 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 RARRES1P49788 294 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 CATSPER3Q86XQ3 398 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 C4orf32Q8N8J7 132 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 PIGOQ8TEQ8 1089 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 TCP11Q8WWU5 503 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 ARNTL2Q8WYA1 636 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 POLR3CQ9BUI4 534 aaPredicted RBP18.9■□□□□ 0.62
CLDND1-219ENST00000508659 CERS4Q9HA82 394 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 C1orf112Q9NSG2 853 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 COL4A3BPQ9Y5P4 624 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 STK24Q9Y6E0 443 aa18.9■□□□□ 0.62
CLDND1-219ENST00000508659 LINC01553A4QN01 128 aa18.89■□□□□ 0.61
CLDND1-219ENST00000508659 RPA1P27694 616 aa18.89■□□□□ 0.61
CLDND1-219ENST00000508659 CCT6AP40227 531 aaKnown RBP18.89■□□□□ 0.61
CLDND1-219ENST00000508659 ATP2C1P98194 919 aaPredicted RBP18.89■□□□□ 0.61
CLDND1-219ENST00000508659 DTHD1Q6ZMT9 781 aa18.89■□□□□ 0.61
CLDND1-219ENST00000508659 FERMT3Q86UX7 667 aa18.89■□□□□ 0.61
CLDND1-219ENST00000508659 NPAS4Q8IUM7 802 aa18.89■□□□□ 0.61
CLDND1-219ENST00000508659 IGSF22Q8N9C0 903 aa18.89■□□□□ 0.61
CLDND1-219ENST00000508659 SP7Q8TDD2 431 aaPredicted RBP18.89■□□□□ 0.61
CLDND1-219ENST00000508659 SNX29Q8TEQ0 813 aa18.89■□□□□ 0.61
CLDND1-219ENST00000508659 TMEM143Q96AN5 459 aa18.89■□□□□ 0.61
CLDND1-219ENST00000508659 ADAM2Q99965 735 aa18.89■□□□□ 0.61
CLDND1-219ENST00000508659 ADGRA3Q8IWK6 1321 aa18.89■□□□□ 0.61
CLDND1-219ENST00000508659 A0A087WZ62 844 aa18.88■□□□□ 0.61
CLDND1-219ENST00000508659 MGEA5O60502 916 aa18.88■□□□□ 0.61
CLDND1-219ENST00000508659 USO1O60763 962 aaKnown RBP18.88■□□□□ 0.61
CLDND1-219ENST00000508659 HSP90AA1P07900 732 aaKnown RBP18.88■□□□□ 0.61
CLDND1-219ENST00000508659 STAG3L1P0CL83 205 aa18.88■□□□□ 0.61
CLDND1-219ENST00000508659 NACC1Q96RE7 527 aa18.88■□□□□ 0.61
CLDND1-219ENST00000508659 TGS1Q96RS0 853 aaKnown RBP18.88■□□□□ 0.61
CLDND1-219ENST00000508659 FDXACB1Q9BRP7 624 aaPredicted RBP18.88■□□□□ 0.61
CLDND1-219ENST00000508659 INO80BQ9C086 356 aaPredicted RBP18.88■□□□□ 0.61
CLDND1-219ENST00000508659 RNF216Q9NWF9 866 aaPredicted RBP18.88■□□□□ 0.61
CLDND1-219ENST00000508659 MTUS1Q9ULD2 1270 aa18.88■□□□□ 0.61
CLDND1-219ENST00000508659 LRFN2Q9ULH4 789 aa18.88■□□□□ 0.61
CLDND1-219ENST00000508659 ARID2Q68CP9 1835 aa18.88■□□□□ 0.61
CLDND1-219ENST00000508659 BMP15O95972 392 aa18.87■□□□□ 0.61
CLDND1-219ENST00000508659 XRCC6P12956 609 aaKnown RBP eCLIP18.87■□□□□ 0.61
CLDND1-219ENST00000508659 ZSCAN20P17040 1043 aaPredicted RBP18.87■□□□□ 0.61
CLDND1-219ENST00000508659 SYT1P21579 422 aa18.87■□□□□ 0.61
CLDND1-219ENST00000508659 MUTP22033 750 aa18.87■□□□□ 0.61
CLDND1-219ENST00000508659 SARSP49591 514 aaKnown RBP18.87■□□□□ 0.61
CLDND1-219ENST00000508659 PDIA5Q14554 519 aa18.87■□□□□ 0.61
CLDND1-219ENST00000508659 KRT79Q5XKE5 535 aa18.87■□□□□ 0.61
CLDND1-219ENST00000508659 KSR1Q8IVT5 923 aa18.87■□□□□ 0.61
CLDND1-219ENST00000508659 MAFAQ8NHW3 353 aaPredicted RBP18.87■□□□□ 0.61
CLDND1-219ENST00000508659 PRPF31Q8WWY3 499 aaKnown RBP18.87■□□□□ 0.61
CLDND1-219ENST00000508659 XPNPEP1Q9NQW7 623 aa18.87■□□□□ 0.61
CLDND1-219ENST00000508659 RGS18Q9NS28 235 aa18.87■□□□□ 0.61
CLDND1-219ENST00000508659 DBR1Q9UK59 544 aaKnown RBP18.87■□□□□ 0.61
CLDND1-219ENST00000508659 CHD9Q3L8U1 2897 aa18.87■□□□□ 0.61
CLDND1-219ENST00000508659 FGFR4P22455 802 aa18.86■□□□□ 0.61
CLDND1-219ENST00000508659 IGFBP4P22692 258 aa18.86■□□□□ 0.61
CLDND1-219ENST00000508659 LAMTOR4Q0VGL1 99 aa18.86■□□□□ 0.61
CLDND1-219ENST00000508659 SLC24A5Q71RS6 500 aa18.86■□□□□ 0.61
CLDND1-219ENST00000508659 SPRED2Q7Z698 418 aa18.86■□□□□ 0.61
CLDND1-219ENST00000508659 RTN4RL1Q86UN2 441 aaPredicted RBP18.86■□□□□ 0.61
CLDND1-219ENST00000508659 FIBCD1Q8N539 461 aa18.86■□□□□ 0.61
CLDND1-219ENST00000508659 RC3H2Q9HBD1 1191 aaKnown RBP18.86■□□□□ 0.61
CLDND1-219ENST00000508659 EVPLQ92817 2033 aa18.86■□□□□ 0.61
CLDND1-219ENST00000508659 ARHGEF35A5YM69 484 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 VWA3AA6NCI4 1184 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 EPOPA6NHQ4 379 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 ASAP2O43150 1006 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 CSDE1O75534 798 aaKnown RBP18.85■□□□□ 0.61
CLDND1-219ENST00000508659 DGKIO75912 1065 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 SRGAP2CP0DJJ0 459 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 PHKA2P46019 1235 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 ERVK-21P61565 698 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 TFDP1Q14186 410 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 BTG3Q14201 252 aaPredicted RBP18.85■□□□□ 0.61
CLDND1-219ENST00000508659 MXD4Q14582 209 aaPredicted RBP18.85■□□□□ 0.61
CLDND1-219ENST00000508659 ARL6IP4Q66PJ3 421 aaKnown RBP18.85■□□□□ 0.61
CLDND1-219ENST00000508659 CATSPER4Q7RTX7 472 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 RNF149Q8NC42 400 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 MCPH1Q8NEM0 835 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 GDPD5Q8WTR4 605 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 SAMD11Q96NU1 681 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 POLR3FQ9H1D9 316 aaPredicted RBP18.85■□□□□ 0.61
CLDND1-219ENST00000508659 DACT1Q9NYF0 836 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 PIN4Q9Y237 131 aaKnown RBP18.85■□□□□ 0.61
CLDND1-219ENST00000508659 PCDHB7Q9Y5E2 793 aa18.85■□□□□ 0.61
CLDND1-219ENST00000508659 A0A087WWV3 80 aa18.84■□□□□ 0.61
CLDND1-219ENST00000508659 PP2D1A8MPX8 630 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms