RNA–Protein interactions for RNA: ENST00000508312.5

DDR1-262, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene DDR1, Length 3,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-262ENST00000508312 PPP1R15BQ5SWA1 713 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 TRMT1LQ7Z2T5 733 aaKnown RBP13.75□□□□□ -0.21
DDR1-262ENST00000508312 NEK8Q86SG6 692 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 DAAM2Q86T65 1068 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 CCDC84Q86UT8 332 aaPredicted RBP13.75□□□□□ -0.21
DDR1-262ENST00000508312 KIAA0825Q8IV33 1275 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 SEMA6BQ9H3T3 888 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 FGFR1OP2Q9NVK5 253 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 A6NHS1 94 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 MYMKA6NI61 221 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 USP17L10C9JJH3 530 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 PPP1R11O60927 126 aaPredicted RBP13.75□□□□□ -0.21
DDR1-262ENST00000508312 RHOBTB3O94955 611 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 TRAPPC10P48553 1259 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 RAD23BP54727 409 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 COPS2P61201 443 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 TBC1D25Q3MII6 688 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 SFMBT2Q5VUG0 894 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 TMEM154Q6P9G4 183 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 FMO2Q99518 471 aa13.75□□□□□ -0.21
DDR1-262ENST00000508312 NOC2LQ9Y3T9 749 aaKnown RBP13.75□□□□□ -0.21
DDR1-262ENST00000508312 SNED1Q8TER0 1413 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 SPDYE3A6NKU9 549 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 PGRMC1O00264 195 aaKnown RBP13.74□□□□□ -0.21
DDR1-262ENST00000508312 POLR2FP61218 127 aaKnown RBP13.74□□□□□ -0.21
DDR1-262ENST00000508312 PDXDC1Q6P996 788 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 DRAXINQ8NBI3 349 aaPredicted RBP13.74□□□□□ -0.21
DDR1-262ENST00000508312 EPAS1Q99814 870 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 PAIP2Q9BPZ3 127 aaKnown RBP13.74□□□□□ -0.21
DDR1-262ENST00000508312 RGL1Q9NZL6 768 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 DLGAP2Q9P1A6 1054 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 LIN7AO14910 233 aaPredicted RBP13.74□□□□□ -0.21
DDR1-262ENST00000508312 HNRNPH3P31942 346 aaKnown RBP13.74□□□□□ -0.21
DDR1-262ENST00000508312 SESN3P58005 492 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 SEPT2Q15019 361 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 NAB2Q15742 525 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 SLC5A9Q2M3M2 681 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 ARL6IP4Q66PJ3 421 aaKnown RBP13.74□□□□□ -0.21
DDR1-262ENST00000508312 DENND2CQ68D51 928 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 OTUD6AQ7L8S5 288 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 PIGWQ7Z7B1 504 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 ZSCAN29Q8IWY8 852 aaPredicted RBP13.74□□□□□ -0.21
DDR1-262ENST00000508312 SNX29Q8TEQ0 813 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.74□□□□□ -0.21
DDR1-262ENST00000508312 FAM210AQ96ND0 272 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 KBTBD4Q9NVX7 518 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 ZMYND8Q9ULU4 1186 aaPredicted RBP13.74□□□□□ -0.21
DDR1-262ENST00000508312 SIK3Q9Y2K2 1263 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 SCN7AQ01118 1682 aa13.74□□□□□ -0.21
DDR1-262ENST00000508312 EDIL3O43854 480 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 GBP1P32455 592 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 RNASELQ05823 741 aaKnown RBP13.73□□□□□ -0.21
DDR1-262ENST00000508312 VPS72Q15906 364 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 CALCRLQ16602 461 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 NUGGCQ68CJ6 796 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 CALML4Q96GE6 196 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 RPS6KC1Q96S38 1066 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 RAB17Q9H0T7 212 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 TMX4Q9H1E5 349 aaPredicted RBP13.73□□□□□ -0.21
DDR1-262ENST00000508312 ETNK1Q9HBU6 452 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 C6orf50Q9HD87 102 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 A0A087X0T9 212 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 MEIS1O00470 390 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 SUN1O94901 812 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 LCA5LO95447 670 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 FAM228BP0C875 321 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 PCP11498 1178 aaKnown RBP13.73□□□□□ -0.21
DDR1-262ENST00000508312 USH1GQ495M9 461 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 ANO7Q6IWH7 933 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 TRIM74Q86UV6 250 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 TRIM73Q86UV7 250 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 ANKRD42Q8N9B4 389 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 LBHD1Q9BQE6 289 aaPredicted RBP13.73□□□□□ -0.21
DDR1-262ENST00000508312 DDX23Q9BUQ8 820 aaKnown RBP13.73□□□□□ -0.21
DDR1-262ENST00000508312 ZMYND12Q9H0C1 365 aa13.73□□□□□ -0.21
DDR1-262ENST00000508312 USP15Q9Y4E8 981 aaPredicted RBP13.73□□□□□ -0.21
DDR1-262ENST00000508312 TCP11X1B4DZS4 312 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 PDE6CP51160 858 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 PLTPP55058 493 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 KLHL30Q0D2K2 578 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 GRB10Q13322 594 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 LRRC23Q53EV4 343 aaPredicted RBP13.72□□□□□ -0.21
DDR1-262ENST00000508312 RNF220Q5VTB9 566 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 C16orf86Q6ZW13 317 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 FAM133AQ8N9E0 248 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 ATXN2LQ8WWM7 1075 aaKnown RBP13.72□□□□□ -0.21
DDR1-262ENST00000508312 IKZF4Q9H2S9 585 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 USP40Q9NVE5 1235 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.72□□□□□ -0.21
DDR1-262ENST00000508312 MYH7BA7E2Y1 1941 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 G3V3G9 751 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 TRAF5O00463 557 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 GDF11O95390 407 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 ALADP13716 330 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 COPB2P35606 906 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 RFC5P40937 340 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 GSTO1P78417 241 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 MAN2A1Q16706 1144 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
DDR1-262ENST00000508312 ARHGAP22Q7Z5H3 698 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms