RNA–Protein interactions for RNA: ENST00000507488.6

ATP2C1-212, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATP2C1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-212ENST00000507488 SIX2Q9NPC8 291 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 VPS18Q9P253 973 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 ZNF214Q9UL59 606 aaPredicted RBP5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 RABGAP1Q9Y3P9 1069 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 ANO9A1A5B4 782 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 USP2O75604 605 aaPredicted RBP5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 ARIH2O95376 493 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 FGFR1OPO95684 399 aaKnown RBP5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 CYP2C8P10632 490 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 MARK3P27448 753 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 ADSSP30520 456 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 GJA5P36382 358 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 MMP14P50281 582 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 VAV2P52735 878 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 RAPGEF1Q13905 1077 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 Q4G0T1 1027 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 CCDC40Q4G0X9 1142 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 C1orf220Q5T0J3 134 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 CCDC60Q8IWA6 550 aaPredicted RBP5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 SYT2Q8N9I0 419 aaPredicted RBP5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 CAGE1Q8TC20 777 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 SLC20A1Q8WUM9 679 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 SPIRE2Q8WWL2 714 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 UPF1Q92900 1129 aaKnown RBP eCLIP5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 SECISBP2LQ93073 1101 aaKnown RBP5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 OTUD5Q96G74 571 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 LRRC27Q9C0I9 530 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 MTFR1LQ9H019 292 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 ACBD3Q9H3P7 528 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 PSD3Q9NYI0 1048 aa5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 HERC5Q9UII4 1024 aaKnown RBP5.04□□□□□ -1.6
ATP2C1-212ENST00000507488 ADRB2P07550 413 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 HNRNPH3P31942 346 aaKnown RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 NF2P35240 595 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 LMAN1P49257 510 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 USP11P51784 963 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 ZNF280AP59817 542 aaPredicted RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PTK2Q05397 1052 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 LRRC63Q05C16 580 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PPP3CAQ08209 521 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 ARHGAP44Q17R89 818 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 LY6KQ17RY6 165 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 HSP90B2PQ58FF3 399 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 SLC39A4Q6P5W5 647 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 B3GNT9Q6UX72 402 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 SEPT14Q6ZU15 432 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 EPM2AIP1Q7L775 607 aaPredicted RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 ARHGEF19Q8IW93 802 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 GUF1Q8N442 669 aaKnown RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 REPS2Q8NFH8 660 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 CCDC102AQ96A19 550 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 TMEM143Q96AN5 459 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 LENG1Q96BZ8 264 aaPredicted RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 GPR88Q9GZN0 384 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 GOPCQ9HD26 462 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 OSGEPQ9NPF4 335 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 A1CFQ9NQ94 594 aaKnown RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 JADE2Q9NQC1 790 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PDGFCQ9NRA1 345 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 HDAC9Q9UKV0 1011 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PLAGL2Q9UPG8 496 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 DNM3Q9UQ16 869 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 NR2E1Q9Y466 385 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PTPRJQ12913 1337 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 ATAD5Q96QE3 1844 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 BRCA1P38398 1863 aaKnown RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 RLFQ13129 1914 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 FRMD3A2A2Y4 597 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 TARSL2A2RTX5 802 aaKnown RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 LRRIQ3A6PVS8 624 aaPredicted RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PHACTR2O75167 634 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 GJB6O95452 261 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 ICAM1P05362 532 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 KLRC1P26715 233 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PON1P27169 355 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 HOXA7P31268 230 aaPredicted RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 KIF11P52732 1056 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PEX3P56589 373 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 FKBP1AP62942 108 aaKnown RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 PSMD2Q13200 908 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 MAN2A1Q16706 1144 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 MAP9Q49MG5 647 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 ODR4Q5SWX8 454 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 SPOPLQ6IQ16 392 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 CBWD2Q8IUF1 395 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 TRIM59Q8IWR1 403 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 AGBL3Q8NEM8 1001 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 SEMA4DQ92854 862 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 SLC5A5Q92911 643 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 KLRG1Q96E93 195 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 TSG101Q99816 390 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 MXRA8Q9BRK3 442 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 IFIH1Q9BYX4 1025 aaKnown RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 TRIM7Q9C029 511 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 DEF6Q9H4E7 631 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 RABEP2Q9H5N1 569 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 AGO4Q9HCK5 861 aaKnown RBP5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 RNF146Q9NTX7 359 aa5.03□□□□□ -1.6
ATP2C1-212ENST00000507488 GPRC5DQ9NZD1 345 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms